fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G03040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022740 not found in 378aa AT4G02590.2 1st_not 0.403773584 II
Gm052263 HAPVYQLGLSLDQGKG in 70/292 AT4G02590.2 1st_not 0.586792452 II
Pt001062 not found in 300aa AT4G02590.2 1st_not 0.601886792 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G03040.1     ---------------------------------------MANNNNIPHDSISDPSP---T
gm052263_Glyma1 ---------------------------------------MANN---PSD-----AP---A
pt001062_POPTR_ ---------------------------------------MANN---PTE-----PP---T
Sb022740_Sorbi1 TSPSPAEQSRPTACREPPEASGPDAWAPTAPAPAPASPGMAGQ---P------PPPGGSE
                                                       **.:   *       .*    

AT1G03040.1     DDFFEQILGLSNFSGSSGSGLS----GIGG--VGPPPMMLQLGSGNEGNHNH-MGAIGGG
gm052263_Glyma1 DDFLEQILGLPNFA-SADSGLSAADVGLAG-AATQAPMMLQLNSADANAHLA--------
pt001062_POPTR_ DDFLQEILGMPNFA-SAEAGLVGADAGLAGAAAAQASMMLQLSSGDGSGHISDLGGAPGG
Sb022740_Sorbi1 DDFLEHFFAFPSAA-SAAAG------GHAG-----------------------------A
                ***::.::.:.. : *: :*      * .*                              

AT1G03040.1     GPVGFHNQMFPLGLSLD----------------------QGKGHGFLKPDE---TGKRFQ
gm052263_Glyma1 -GAAFHAPVYQLGLSLD----------------------QGKG-GFMKPEEASASGKRFR
pt001062_POPTR_ GSAGFHG--FPLGLSLE----------------------QGKG-GFLKPEEASGSGKRFR
Sb022740_Sorbi1 GAGGDHP--FPLALSLDAAAEPKPDRDPVQLAGLFPPVFAGAG-GVQQPHL---------
                   . *   : *.***:                       * * *. :*.          

AT1G03040.1     DDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERI
gm052263_Glyma1 DDVVDNRA---KNVFHGQPMPTTMPAAPHPPA-IRPRVRARRGQATDPHSIAERLRRERI
pt001062_POPTR_ DEIVDGRA---KNVFHGQPMPTTVAIAPHPPA-MRPRVRARRGQATDPHSIAERLRRERI
Sb022740_Sorbi1 ------RGPPPPQMFQAQPKPGEGGMAPQPPA-PRPKVRARRGQATDPHSIAERLRRERI
                      *      :*:.** .      *:  :  **:***********************

AT1G03040.1     AERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPL
gm052263_Glyma1 AERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL
pt001062_POPTR_ AERIRALQELVPSVNKTDRATMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL
Sb022740_Sorbi1 AERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPL
                ***:*:******..******:*:***:************************* **:::**

AT1G03040.1     SSSVEDET------QAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMA
gm052263_Glyma1 -SSVEEEGGEGARNRPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASA
pt001062_POPTR_ -SSVEDETGEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATA
Sb022740_Sorbi1 --SVKGEASDSGSTQHIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMA
                  **: *       :  *:***.****:********::*****:*******:****** *

AT1G03040.1     IYHSQPPDTSSSIVKPEMNPPP
gm052263_Glyma1 IYQSQPPDT-SSIVKPETNPPS
pt001062_POPTR_ IYHTQPPDT-TTIVKPETNPPS
Sb022740_Sorbi1 IYDTQHSQDGHSLMKPEPNTSS
                **.:* .:   :::*** *...
BoxShade v3.31 C (beta, 970507) Output
AT1G03040.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A N N N N I P H D S I S D P S P - - - T
gm052263_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A N N - - - P S D - - - - - A P - - - A
pt001062_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A N N - - - P T E - - - - - P P - - - T
Sb022740_Sorbi1    T S P S P A E Q S R P T A C R E P P E A S G P D A W A P T A P A P A P A S P G M A G Q - - - P - - - - - - P P P G G S E
 
AT1G03040.1     D D F F E Q I L G L S N F S G S S G S G L S - - - - G I G G - - V G P P P M M L Q L G S G N E G N H N H - M G A I G G G
gm052263_Glyma1    D D F L E Q I L G L P N F A - S A D S G L S A A D V G L A G - A A T Q A P M M L Q L N S A D A N A H L A - - - - - - - -
pt001062_POPTR_    D D F L Q E I L G M P N F A - S A E A G L V G A D A G L A G A A A A Q A S M M L Q L S S G D G S G H I S D L G G A P G G
Sb022740_Sorbi1    D D F L E H F F A F P S A A - S A A A G - - - - - - G H A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A
 
AT1G03040.1     G P V G F H N Q M F P L G L S L D - - - - - - - - - - - - - - - - - - - - - - Q G K G H G F L K P D E - - - T G K R F Q
gm052263_Glyma1    - G A A F H A P V Y Q L G L S L D - - - - - - - - - - - - - - - - - - - - - - Q G K G - G F M K P E E A S A S G K R F R
pt001062_POPTR_    G S A G F H G - - F P L G L S L E - - - - - - - - - - - - - - - - - - - - - - Q G K G - G F L K P E E A S G S G K R F R
Sb022740_Sorbi1    G A G G D H P - - F P L A L S L D A A A E P K P D R D P V Q L A G L F P P V F A G A G - G V Q Q P H L - - - - - - - - -
 
AT1G03040.1     D D V L D N R C S S M K P I F H G Q P M S Q P A P P M P H Q Q S T I R P R V R A R R G Q A T D P H S I A E R L R R E R I
gm052263_Glyma1    D D V V D N R A - - - K N V F H G Q P M P T T M P A A P H P P A - I R P R V R A R R G Q A T D P H S I A E R L R R E R I
pt001062_POPTR_    D E I V D G R A - - - K N V F H G Q P M P T T V A I A P H P P A - M R P R V R A R R G Q A T D P H S I A E R L R R E R I
Sb022740_Sorbi1    - - - - - - R G P P P P Q M F Q A Q P K P G E G G M A P Q P P A - P R P K V R A R R G Q A T D P H S I A E R L R R E R I
 
AT1G03040.1     A E R I R S L Q E L V P T V N K T D R A A M I D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T E M P L
gm052263_Glyma1    A E R I R A L Q E L V P S V N K T D R A A M L D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D I P L
pt001062_POPTR_    A E R I R A L Q E L V P S V N K T D R A T M L D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D I P L
Sb022740_Sorbi1    A E R M R A L Q E L V P N T N K T D R A A M L D E I L D Y V K F L R L Q V K V L S M S R L G G A G A V A Q L V A D I P L
 
AT1G03040.1     S S S V E D E T - - - - - - Q A V W E K W S N D G T E R Q V A K L M E E N V G A A M Q L L Q S K A L C I M P I S L A M A
gm052263_Glyma1    - S S V E E E G G E G A R N R P A W D K W S N D G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I M P I S L A S A
pt001062_POPTR_    - S S V E D E T G E G G R N Q P A W E K W S N D G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I M P I S L A T A
Sb022740_Sorbi1    - - S V K G E A S D S G S T Q H I W E K W S T D G T E K Q V A K L M E E D I G A A M Q F L Q S K A L C M M P I S L A M A
 
AT1G03040.1     I Y H S Q P P D T S S S I V K P E M N P P P
gm052263_Glyma1    I Y Q S Q P P D T - S S I V K P E T N P P S
pt001062_POPTR_    I Y H T Q P P D T - T T I V K P E T N P P S
Sb022740_Sorbi1    I Y D T Q H S Q D G H S L M K P E P N T S S
 
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