fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G03040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001062 not found in 300aa AT4G02590.2 1st_not 0.601886792 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G03040.1     MANNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGL----SGIGGVGP--PPMMLQL
pt001062_POPTR_ MANNPTEP--------PTDDFLQEILGMPNFA-SAEAGLVGADAGLAGAAAAQASMMLQL
                **** . *        *****:::***:.**: *: :**    :*:.*...  ..*****

AT1G03040.1     GSGNEGNH-NHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDE---TGKRFQDDVL
pt001062_POPTR_ SSGDGSGHISDLGGAPGGGSAGFHG--FPLGLSLEQGKG-GFLKPEEASGSGKRFRDEIV
                .**: ..* ..:*.  ***..***.  *******:**** *****:*   :****:*:::

AT1G03040.1     DNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERI
pt001062_POPTR_ DGRA---KNVFHGQPMPTTVAIAPHPPA-MRPRVRARRGQATDPHSIAERLRRERIAERI
                *.*.   * :******. ...  **  : :******************************

AT1G03040.1     RSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSV
pt001062_POPTR_ RALQELVPSVNKTDRATMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL-SSV
                *:******:*******:*:*********************************::** ***

AT1G03040.1     EDET------QAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHS
pt001062_POPTR_ EDETGEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLATAIYHT
                ****      *..**************************:************** ****:

AT1G03040.1     QPPDTSSSIVKPEMNPPP
pt001062_POPTR_ QPPDT-TTIVKPETNPPS
                ***** ::***** ***.
BoxShade v3.31 C (beta, 970507) Output
AT1G03040.1     M A N N N N I P H D S I S D P S P T D D F F E Q I L G L S N F S G S S G S G L - - - - S G I G G V G P - - P P M M L Q L
pt001062_POPTR_    M A N N P T E P - - - - - - - - P T D D F L Q E I L G M P N F A - S A E A G L V G A D A G L A G A A A A Q A S M M L Q L
 
AT1G03040.1     G S G N E G N H - N H M G A I G G G G P V G F H N Q M F P L G L S L D Q G K G H G F L K P D E - - - T G K R F Q D D V L
pt001062_POPTR_    S S G D G S G H I S D L G G A P G G G S A G F H G - - F P L G L S L E Q G K G - G F L K P E E A S G S G K R F R D E I V
 
AT1G03040.1     D N R C S S M K P I F H G Q P M S Q P A P P M P H Q Q S T I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I
pt001062_POPTR_    D G R A - - - K N V F H G Q P M P T T V A I A P H P P A - M R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I
 
AT1G03040.1     R S L Q E L V P T V N K T D R A A M I D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T E M P L S S S V
pt001062_POPTR_    R A L Q E L V P S V N K T D R A T M L D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D I P L - S S V
 
AT1G03040.1     E D E T - - - - - - Q A V W E K W S N D G T E R Q V A K L M E E N V G A A M Q L L Q S K A L C I M P I S L A M A I Y H S
pt001062_POPTR_    E D E T G E G G R N Q P A W E K W S N D G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I M P I S L A T A I Y H T
 
AT1G03040.1     Q P P D T S S S I V K P E M N P P P
pt001062_POPTR_    Q P P D T - T T I V K P E T N P P S
 
0