fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G03040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022740 not found in 378aa AT4G02590.2 1st_not 0.403773584 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G03040.1     MANNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGLS--------------GIGGVG
Sb022740_Sorbi1 ------------TSPSPA----EQSRPTACREPPEASGPDAWAPTAPAPAPASPGMAGQP
                            :.***:    **    :  . ...** .              *:.*  

AT1G03040.1     PPP------------MMLQLGSGNEGNHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHG
Sb022740_Sorbi1 PPPGGSEDDFLEHFFAFPSAASAAAGGHAGAGA-GGDHP-------FPLALSLDAAAEP-
                ***             : . .*.  *.*   ** **. *       ***.**** .    

AT1G03040.1     FLKPDETGKRFQDDVLDNRCSSMKPIFHG-----QP-MSQPAPP-------------MPH
Sb022740_Sorbi1 --KPD------RDPV--QLAGLFPPVFAGAGGVQQPHLRGPPPPQMFQAQPKPGEGGMAP
                  ***      :* *  : .. : *:* *     ** :  *.**             *. 

AT1G03040.1     QQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDY
Sb022740_Sorbi1 QPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDY
                * .: **:**************************:*:******..********:***:**

AT1G03040.1     VKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLS----SSVEDETQAVWEKWSNDGTERQVA
Sb022740_Sorbi1 VKFLRLQVKVLSMSRLGGAGAVAQLVADIPLSVKGEASDSGSTQHIWEKWSTDGTEKQVA
                *********************** **:::***    :* ...** :*****.****:***

AT1G03040.1     KLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSIVKPEMNPPP
Sb022740_Sorbi1 KLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHSQDGHSLMKPEPNTSS
                *****::*****:*******:**********.:* .: . *::*** *...
BoxShade v3.31 C (beta, 970507) Output
AT1G03040.1     M A N N N N I P H D S I S D P S P T D D F F E Q I L G L S N F S G S S G S G L S - - - - - - - - - - - - - - G I G G V G
Sb022740_Sorbi1    - - - - - - - - - - - - T S P S P A - - - - E Q S R P T A C R E P P E A S G P D A W A P T A P A P A P A S P G M A G Q P
 
AT1G03040.1     P P P - - - - - - - - - - - - M M L Q L G S G N E G N H N H M G A I G G G G P V G F H N Q M F P L G L S L D Q G K G H G
Sb022740_Sorbi1    P P P G G S E D D F L E H F F A F P S A A S A A A G G H A G A G A - G G D H P - - - - - - - F P L A L S L D A A A E P -
 
AT1G03040.1     F L K P D E T G K R F Q D D V L D N R C S S M K P I F H G - - - - - Q P - M S Q P A P P - - - - - - - - - - - - - M P H
Sb022740_Sorbi1    - - K P D - - - - - - R D P V - - Q L A G L F P P V F A G A G G V Q Q P H L R G P P P P Q M F Q A Q P K P G E G G M A P
 
AT1G03040.1     Q Q S T I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R S L Q E L V P T V N K T D R A A M I D E I V D Y
Sb022740_Sorbi1    Q P P A P R P K V R A R R G Q A T D P H S I A E R L R R E R I A E R M R A L Q E L V P N T N K T D R A A M L D E I L D Y
 
AT1G03040.1     V K F L R L Q V K V L S M S R L G G A G A V A P L V T E M P L S - - - - S S V E D E T Q A V W E K W S N D G T E R Q V A
Sb022740_Sorbi1    V K F L R L Q V K V L S M S R L G G A G A V A Q L V A D I P L S V K G E A S D S G S T Q H I W E K W S T D G T E K Q V A
 
AT1G03040.1     K L M E E N V G A A M Q L L Q S K A L C I M P I S L A M A I Y H S Q P P D T S S S I V K P E M N P P P
Sb022740_Sorbi1    K L M E E D I G A A M Q F L Q S K A L C M M P I S L A M A I Y D T Q H S Q D G H S L M K P E P N T S S
 
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