fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G03040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052263 HAPVYQLGLSLDQGKG in 70/292 AT4G02590.2 1st_not 0.586792452 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G03040.1     MANNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGLS----GIGGVGP-PPMMLQLG
gm052263_Glyma1 MANN---PSD-----APADDFLEQILGLPNFA-SADSGLSAADVGLAGAATQAPMMLQLN
                ****   * *     :*:***:******.**: *:.****    *:.*... .******.

AT1G03040.1     SGNEGNHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDE---TGKRFQDDVLDN
gm052263_Glyma1 SADANAH-----LAGA---AFHAPVYQLGLSLDQGKG-GFMKPEEASASGKRFRDDVVDN
                *.: . *     :.*.   .**  :: ********** **:**:*   :****:***:**

AT1G03040.1     RCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRS
gm052263_Glyma1 RA---KNVFHGQPMPTTMPAAPHPPA-IRPRVRARRGQATDPHSIAERLRRERIAERIRA
                *.   * :******. . *. **  : ********************************:

AT1G03040.1     LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVED
gm052263_Glyma1 LQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPL-SSVEE
                ******:*********:*********************************::** ****:

AT1G03040.1     E------TQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQP
gm052263_Glyma1 EGGEGARNRPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQP
                *      .:..*:************************:************** ***:***

AT1G03040.1     PDTSSSIVKPEMNPPP
gm052263_Glyma1 PDT-SSIVKPETNPPS
                *** ******* ***.
BoxShade v3.31 C (beta, 970507) Output
AT1G03040.1     M A N N N N I P H D S I S D P S P T D D F F E Q I L G L S N F S G S S G S G L S - - - - G I G G V G P - P P M M L Q L G
gm052263_Glyma1    M A N N - - - P S D - - - - - A P A D D F L E Q I L G L P N F A - S A D S G L S A A D V G L A G A A T Q A P M M L Q L N
 
AT1G03040.1     S G N E G N H N H M G A I G G G G P V G F H N Q M F P L G L S L D Q G K G H G F L K P D E - - - T G K R F Q D D V L D N
gm052263_Glyma1    S A D A N A H - - - - - L A G A - - - A F H A P V Y Q L G L S L D Q G K G - G F M K P E E A S A S G K R F R D D V V D N
 
AT1G03040.1     R C S S M K P I F H G Q P M S Q P A P P M P H Q Q S T I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R S
gm052263_Glyma1    R A - - - K N V F H G Q P M P T T M P A A P H P P A - I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R I R A
 
AT1G03040.1     L Q E L V P T V N K T D R A A M I D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T E M P L S S S V E D
gm052263_Glyma1    L Q E L V P S V N K T D R A A M L D E I V D Y V K F L R L Q V K V L S M S R L G G A G A V A P L V T D I P L - S S V E E
 
AT1G03040.1     E - - - - - - T Q A V W E K W S N D G T E R Q V A K L M E E N V G A A M Q L L Q S K A L C I M P I S L A M A I Y H S Q P
gm052263_Glyma1    E G G E G A R N R P A W D K W S N D G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I M P I S L A S A I Y Q S Q P
 
AT1G03040.1     P D T S S S I V K P E M N P P P
gm052263_Glyma1    P D T - S S I V K P E T N P P S
 
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