fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G03040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007179 HAPVYQLGLSLEQGKG in 70/292 AT4G02590.2 not_not 0.573584905 III
Gm026652 HAPPYQLGLSLDQGKG in 62/283 AT4G02590.2 not_not 0.569811320 III
Gm004016 HAPPYQLGLSLDQGKG in 53/286 AT4G02590.2 not_not 0.490566037 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G03040.1     MANNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGLSG-----IGGVGPPPMMLQLG
gm007179_Glyma0 MANN---PSD-----APADDFLEQILGLPTFA-SADSGLSAADVGLAGAATQSPMMLQLS
gm026652_Glyma1 MANH---PSE-----APTDDFLEQILGLSTFA-SADP-----------AADASPMMLQLN
gm004016_Glyma0 MANH---PSQ-----ASTDDFLDQILGLSTFA-S---------------ADASPMMLQLN
                ***:   * :     :.:***::*****..*: *               .  .******.

AT1G03040.1     SGNEG---NHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDE---TGKRFQDDV
gm007179_Glyma0 SAD-----ANAHLA------GASFHAPVYQLGLSLEQGKGR-FMKPDEASASGKRFRDDV
gm026652_Glyma1 SGDAATHLAATHL--------AAFHAPPYQLGLSLDQGKGP-FLTPEDASGSGKRFRDDV
gm004016_Glyma0 SGD-----AATHL--------ASFHAPPYQLGLSLDQGKGP-FLTPEDASGSGKRFRDDA
                *.:        *:        ..**   : *****:****  *:.*::   :****:**.

AT1G03040.1     LDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAER
gm007179_Glyma0 VDNRA---KHVFHGQPMPTTMPAAPHPPA-IRPRVRARRGQATDPHSIAERLRRERIAER
gm026652_Glyma1 VDTRP---KNFFHGQPMPTTVPTAPHPPA-VRPRVRARRGQATDPHSIAERLRRERIAER
gm004016_Glyma0 VDTRP---NNVFDGQPMPTTVPTAPHLPA-VRPRVRARRGQATDPHSIAERLRRERIAER
                :*.*    : .*.****. . *. **  : :*****************************

AT1G03040.1     IRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLS------------MSRLGGAGAV
gm007179_Glyma0 IRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS------------MSRLGGAGAV
gm026652_Glyma1 IRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLS------------MSRLGGAGAV
gm004016_Glyma0 IRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKGLNCGLNCFPPMGSLIFNICDSDAV
                **:******:*********:*************** *.            : .: .:.**

AT1G03040.1     APLVTEMPLSSSVED-----ETQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCI
gm007179_Glyma0 APLVTDIPLSSVEEEGGEGARNRPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCI
gm026652_Glyma1 APLVTDIPLSSVEEEGGEG-RNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCI
gm004016_Glyma0 APLVTDIPLSSVEEEGGEG-RNQPAWEKCSNDGTERQVAKLMEENVGAAMQFLQSKALCI
                *****::****  *:     ..:..*:* **********************:********

AT1G03040.1     MPISLAMAIYHSQPPDTSSSIVKPEMNPPP
gm007179_Glyma0 MPISLASAIYQSQPPDT-SSIVKHETSPPS
gm026652_Glyma1 MPVSLASAIYQSQPSGT-SSIVKPETNPPS
gm004016_Glyma0 MPVSLASAIYQSQPSDT-SSIVKPEINPPS
                **:*** ***:***..* ***** * .**.
BoxShade v3.31 C (beta, 970507) Output
AT1G03040.1     M A N N N N I P H D S I S D P S P T D D F F E Q I L G L S N F S G S S G S G L S G - - - - - I G G V G P P P M M L Q L G
gm007179_Glyma0    M A N N - - - P S D - - - - - A P A D D F L E Q I L G L P T F A - S A D S G L S A A D V G L A G A A T Q S P M M L Q L S
gm026652_Glyma1    M A N H - - - P S E - - - - - A P T D D F L E Q I L G L S T F A - S A D P - - - - - - - - - - - A A D A S P M M L Q L N
gm004016_Glyma0    M A N H - - - P S Q - - - - - A S T D D F L D Q I L G L S T F A - S - - - - - - - - - - - - - - - A D A S P M M L Q L N
 
AT1G03040.1     S G N E G - - - N H N H M G A I G G G G P V G F H N Q M F P L G L S L D Q G K G H G F L K P D E - - - T G K R F Q D D V
gm007179_Glyma0    S A D - - - - - A N A H L A - - - - - - G A S F H A P V Y Q L G L S L E Q G K G R - F M K P D E A S A S G K R F R D D V
gm026652_Glyma1    S G D A A T H L A A T H L - - - - - - - - A A F H A P P Y Q L G L S L D Q G K G P - F L T P E D A S G S G K R F R D D V
gm004016_Glyma0    S G D - - - - - A A T H L - - - - - - - - A S F H A P P Y Q L G L S L D Q G K G P - F L T P E D A S G S G K R F R D D A
 
AT1G03040.1     L D N R C S S M K P I F H G Q P M S Q P A P P M P H Q Q S T I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R
gm007179_Glyma0    V D N R A - - - K H V F H G Q P M P T T M P A A P H P P A - I R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R
gm026652_Glyma1    V D T R P - - - K N F F H G Q P M P T T V P T A P H P P A - V R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R
gm004016_Glyma0    V D T R P - - - N N V F D G Q P M P T T V P T A P H L P A - V R P R V R A R R G Q A T D P H S I A E R L R R E R I A E R
 
AT1G03040.1     I R S L Q E L V P T V N K T D R A A M I D E I V D Y V K F L R L Q V K V L S - - - - - - - - - - - - M S R L G G A G A V
gm007179_Glyma0    I R A L Q E L V P S V N K T D R A A M L D E I V D Y V K F L R L Q V K V L S - - - - - - - - - - - - M S R L G G A G A V
gm026652_Glyma1    I R A L Q E L V P S V N K T D R A A M L D E I V D Y V K F L R L Q V K V L S - - - - - - - - - - - - M S R L G G A G A V
gm004016_Glyma0    I R A L Q E L V P S V N K T D R A A M L D E I V D Y V K F L R L Q V K G L N C G L N C F P P M G S L I F N I C D S D A V
 
AT1G03040.1     A P L V T E M P L S S S V E D - - - - - E T Q A V W E K W S N D G T E R Q V A K L M E E N V G A A M Q L L Q S K A L C I
gm007179_Glyma0    A P L V T D I P L S S V E E E G G E G A R N R P A W D K W S N D G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I
gm026652_Glyma1    A P L V T D I P L S S V E E E G G E G - R N Q P A W E K W S N D G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I
gm004016_Glyma0    A P L V T D I P L S S V E E E G G E G - R N Q P A W E K C S N D G T E R Q V A K L M E E N V G A A M Q F L Q S K A L C I
 
AT1G03040.1     M P I S L A M A I Y H S Q P P D T S S S I V K P E M N P P P
gm007179_Glyma0    M P I S L A S A I Y Q S Q P P D T - S S I V K H E T S P P S
gm026652_Glyma1    M P V S L A S A I Y Q S Q P S G T - S S I V K P E T N P P S
gm004016_Glyma0    M P V S L A S A I Y Q S Q P S D T - S S I V K P E I N P P S
 
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