fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G03790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004680 not found in 382aa AT1G03790.1 1st_1st 0.496047430 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G03790.1     MDVVCTE-------HQMRKPT-----VEIPPRKLLLSSKSFPSDSSSPRSPRKHNWNKSN
pt004680_POPTR_ MSTICAEQHKPYTPHQLLSPKRPFRDLEILPGKLLTKKTHQETLDMSPYETNLQRFLPYN
                *..:*:*       **: .*.     :** * *** ...   : . ** ... :.:   *

AT1G03790.1     KITSEHEEDNEDNNRENKEYCYDSDSDDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAH
pt004680_POPTR_ DYSNEKVLDGE---------------LDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAH
                . :.*:  *.*                ***:******:***:******************

AT1G03790.1     PGEKARRRDPRRFQYSGEVCPEFRRGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGK
pt004680_POPTR_ PGEKARRRDPRRFHYSGTVCPEFKRGG-CSRGENCEFSHGVFECWLHPSRYRTEACKDGK
                *************:*** *****:*** ****::***:********** ***********

AT1G03790.1     HCKRKVCFFAHSPRQLRVLPPENVSGVS-ASP-SPAAKNPCCLFC---SSSPTSTLLGNL
pt004680_POPTR_ NCKRKVCFFAHSPRQLRILPEVSSRNKSLASPCSSLNHSHCCVVCHSMTSSPTSTLLG-M
                :****************:**  .  . * *** *.  :. **:.*   :********* :

AT1G03790.1     SHLSR--SPSLSPPMSPA--NKAAAFSRLRNRAASAVSAAAAAGSMNYKDVLSELVNSLD
pt004680_POPTR_ SHMSPPLSPSLSPPLSPVKHQSLSGFSPI-SRYNETLS-KFRAGVVSYKDVLSELMSSLE
                **:*   *******:**.  :. :.** : .*  .::*    ** :.********:.**:

AT1G03790.1     SMSLAEALQASSSSPV------------TTP----VSAAAAAFASSCGLSNQRLHLQQQQ
pt004680_POPTR_ AMNFNEG--ASVSSPMSLSTNHNRNVNSTTPWNIDVSFSG-----------------EDQ
                :*.: *.  ** ***:            ***    ** :.                 ::*

AT1G03790.1     PSSPLQFALSPSTPSYLTNSPQANFFSDDFTPRRRQMNDFTAMTAVRENTNIEDG--SC-
pt004680_POPTR_ P----QFILSPSTP-----TPSSKFFNGDCSSNKGLFVD----DKINDHNNIGDGGLACT
                *    ** ******     :*.::**..* :..:  : *      :.::.** **  :* 

AT1G03790.1     GDPDLGWVNDLLT
pt004680_POPTR_ SDPDLGWVNELLM
                .********:**
BoxShade v3.31 C (beta, 970507) Output
AT1G03790.1     M D V V C T E - - - - - - - H Q M R K P T - - - - - V E I P P R K L L L S S K S F P S D S S S P R S P R K H N W N K S N
pt004680_POPTR_    M S T I C A E Q H K P Y T P H Q L L S P K R P F R D L E I L P G K L L T K K T H Q E T L D M S P Y E T N L Q R F L P Y N
 
AT1G03790.1     K I T S E H E E D N E D N N R E N K E Y C Y D S D S D D P Y A S D H F R M F E F K I R R C T R S R S H D W T D C P F A H
pt004680_POPTR_    D Y S N E K V L D G E - - - - - - - - - - - - - - - L D P Y S S D H F R M Y E F K V R R C T R S R S H D W T D C P F A H
 
AT1G03790.1     P G E K A R R R D P R R F Q Y S G E V C P E F R R G G D C S R G D D C E F A H G V F E C W L H P I R Y R T E A C K D G K
pt004680_POPTR_    P G E K A R R R D P R R F H Y S G T V C P E F K R G G - C S R G E N C E F S H G V F E C W L H P S R Y R T E A C K D G K
 
AT1G03790.1     H C K R K V C F F A H S P R Q L R V L P P E N V S G V S - A S P - S P A A K N P C C L F C - - - S S S P T S T L L G N L
pt004680_POPTR_    N C K R K V C F F A H S P R Q L R I L P E V S S R N K S L A S P C S S L N H S H C C V V C H S M T S S P T S T L L G - M
 
AT1G03790.1     S H L S R - - S P S L S P P M S P A - - N K A A A F S R L R N R A A S A V S A A A A A G S M N Y K D V L S E L V N S L D
pt004680_POPTR_    S H M S P P L S P S L S P P L S P V K H Q S L S G F S P I - S R Y N E T L S - K F R A G V V S Y K D V L S E L M S S L E
 
AT1G03790.1     S M S L A E A L Q A S S S S P V - - - - - - - - - - - - T T P - - - - V S A A A A A F A S S C G L S N Q R L H L Q Q Q Q
pt004680_POPTR_    A M N F N E G - - A S V S S P M S L S T N H N R N V N S T T P W N I D V S F S G - - - - - - - - - - - - - - - - - E D Q
 
AT1G03790.1     P S S P L Q F A L S P S T P S Y L T N S P Q A N F F S D D F T P R R R Q M N D F T A M T A V R E N T N I E D G - - S C -
pt004680_POPTR_    P - - - - Q F I L S P S T P - - - - - T P S S K F F N G D C S S N K G L F V D - - - - D K I N D H N N I G D G G L A C T
 
AT1G03790.1     G D P D L G W V N D L L T
pt004680_POPTR_    S D P D L G W V N E L L M
 
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