fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G03840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004294 not found in 475aa AT1G03840.1 1st_1st 0.508064516 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G03840.1     -----MTTEDQTISSSGGYVQSSSTTDHVDHHHHDQHESLNPPLVKKKRNLPGNPDPEAE
pt004294_POPTR_ MLEKIMATEEAITSSNNGFVENPVGGS-------------NPPALKKKRNLPGTPDPEAE
                     *:**:   **..*:*:..   .             *** :********.******

AT1G03840.1     VIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPE
pt004294_POPTR_ VIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVKKRVYVCPE
                ***********************************************.***:********

AT1G03840.1     KSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRC
pt004294_POPTR_ KTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKC
                *:******:***************************:*********************:*

AT1G03840.1     DCGTIFSRRDSFITHRAFCDALAEETARLNAASHLKSFAATAGSNLNYHYLMGTLIPSPS
pt004294_POPTR_ DCGTLFSRRDSFITHRAFCDALAEETARVNAVSSINNL--TAGS-INYH-LMGN------
                ****:***********************:**.* ::.:  **** :*** ***.      

AT1G03840.1     LPQPPSFPFGPPQPQHHHHHQFPITTNNFDHQDVMKPASTLSLW------------SGGN
pt004294_POPTR_ -------PLGPNMAQHFSSIFKPISSN--DHQ---TRQGGVSLWMNQGVPQVSEALMGNN
                       *:**  .**.     **::*  ***   .  . :***             *.*

AT1G03840.1     INHHQQV--------TIEDRMAPQ-PHSPQED---YNW-VFGNA----NNHGELITTSDS
pt004294_POPTR_ IQEIHQLRSANSSGAMFGDLLAVSCSHAPPSDHYQFNWPVFGNKISSNNAHEELTST---
                *:. :*:         : * :* . .*:* .*   :** ****     * * ** :*   

AT1G03840.1     LITHDNNINIVQSKENANGATSLSVPSLFSSVDQITQDANAASVAVANMSATALLQKAAQ
pt004294_POPTR_ LVLPLTNV-----KEAAAASQLASVPSLYS-----TQQQQSHQTTSANMSATALLQKAAQ
                *:   .*:     ** * .:   *****:*     **: :: ..: **************

AT1G03840.1     MGATSSTSPTTTITTDQSAYLQSFASKSN-QIVEDGGSDRFFASFGSNSVELMSNNNNGL
pt004294_POPTR_ IGAT-STDPS---------FLGSFALKSNAKKVQDG--NKFCGLYGSSPV-----STNPA
                :*** **.*:         :* *** *** : *:**  ::* . :**..*     ..*  

AT1G03840.1     HEIGNPRNGVTVVSGMGELQNYPWKRRRV--DIGNAGGGGQTRDFLGVGVQTICHSSSIN
pt004294_POPTR_ SDVEN--SGSDQISSLNQLQMYP-KRQKIFQSDQDSPAGGQTRDFLGVGVQAICHPSSIN
                 :: *  .*   :*.:.:** ** **:::  .  :: .*************:***.****

AT1G03840.1     GWI
pt004294_POPTR_ GWI
                ***
BoxShade v3.31 C (beta, 970507) Output
AT1G03840.1     - - - - - M T T E D Q T I S S S G G Y V Q S S S T T D H V D H H H H D Q H E S L N P P L V K K K R N L P G N P D P E A E
pt004294_POPTR_    M L E K I M A T E E A I T S S N N G F V E N P V G G S - - - - - - - - - - - - - N P P A L K K K R N L P G T P D P E A E
 
AT1G03840.1     V I A L S P K T L M A T N R F L C E I C G K G F Q R D Q N L Q L H R R G H N L P W K L K Q R T S K E V R K R V Y V C P E
pt004294_POPTR_    V I A L S P K T L M A T N R F L C E I C G K G F Q R D Q N L Q L H R R G H N L P W K L K Q R T N K E V K K R V Y V C P E
 
AT1G03840.1     K S C V H H H P T R A L G D L T G I K K H F C R K H G E K K W K C E K C A K R Y A V Q S D W K A H S K T C G T R E Y R C
pt004294_POPTR_    K T C V H H H P S R A L G D L T G I K K H F C R K H G E K K W K C E K C S K R Y A V Q S D W K A H S K T C G T R E Y K C
 
AT1G03840.1     D C G T I F S R R D S F I T H R A F C D A L A E E T A R L N A A S H L K S F A A T A G S N L N Y H Y L M G T L I P S P S
pt004294_POPTR_    D C G T L F S R R D S F I T H R A F C D A L A E E T A R V N A V S S I N N L - - T A G S - I N Y H - L M G N - - - - - -
 
AT1G03840.1     L P Q P P S F P F G P P Q P Q H H H H H Q F P I T T N N F D H Q D V M K P A S T L S L W - - - - - - - - - - - - S G G N
pt004294_POPTR_    - - - - - - - P L G P N M A Q H F S S I F K P I S S N - - D H Q - - - T R Q G G V S L W M N Q G V P Q V S E A L M G N N
 
AT1G03840.1     I N H H Q Q V - - - - - - - - T I E D R M A P Q - P H S P Q E D - - - Y N W - V F G N A - - - - N N H G E L I T T S D S
pt004294_POPTR_    I Q E I H Q L R S A N S S G A M F G D L L A V S C S H A P P S D H Y Q F N W P V F G N K I S S N N A H E E L T S T - - -
 
AT1G03840.1     L I T H D N N I N I V Q S K E N A N G A T S L S V P S L F S S V D Q I T Q D A N A A S V A V A N M S A T A L L Q K A A Q
pt004294_POPTR_    L V L P L T N V - - - - - K E A A A A S Q L A S V P S L Y S - - - - - T Q Q Q Q S H Q T T S A N M S A T A L L Q K A A Q
 
AT1G03840.1     M G A T S S T S P T T T I T T D Q S A Y L Q S F A S K S N - Q I V E D G G S D R F F A S F G S N S V E L M S N N N N G L
pt004294_POPTR_    I G A T - S T D P S - - - - - - - - - F L G S F A L K S N A K K V Q D G - - N K F C G L Y G S S P V - - - - - S T N P A
 
AT1G03840.1     H E I G N P R N G V T V V S G M G E L Q N Y P W K R R R V - - D I G N A G G G G Q T R D F L G V G V Q T I C H S S S I N
pt004294_POPTR_    S D V E N - - S G S D Q I S S L N Q L Q M Y P - K R Q K I F Q S D Q D S P A G G Q T R D F L G V G V Q A I C H P S S I N
 
AT1G03840.1     G W I
pt004294_POPTR_    G W I
 
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