fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04240.1 NLKETELRLGLPGTDN at 10/189 in AT1G04240.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022746 not found in 372aa AT1G04240.1 not_1st 0.422784810 II
Gm055370 NLKATELRLGLPGTEE in 18/194 AT5G43700.1 1st_not 0.610126582 II
Gm002569 NLKATELRLGLPGTED in 17/248 AT1G04240.1 not_1st 0.511392405 II
Gm028044 not found in 91aa AT1G04240.1 not_1st 0.405063291 II
Pt001236 NLEATELRLGLPGTAT in 13/201 AT5G43700.1 1st_not 0.592405063 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04240.1     ------------------------------MD----EF-----------VNLKETELRLG
gm002569_Glyma0 ------------------------------ME-SRVVFEND--------LNLKATELRLG
Sb022746_Sorbi1 SPRLHPHLLLILILLSLSISRASKNAASSYLA-SKQAFSSDSFMEIVDADNLSATELRLG
gm028044_Glyma1 ------------------------------------------------------------
pt001236_POPTR_ ------------------------------ME-----FERD--------LNLEATELRLG
gm055370_Glyma2 ------------------------------MENTTVTYQTD--------LNLKATELRLG
                                                                            

AT1G04240.1     LPGTDN-VCEAKERVSCCNNNNKRVLSTDTEKEI---ESSSR------------------
gm002569_Glyma0 LPGT-----EDKTVHAISIRNNKRQVPETSQESV----SISKASPDQHFVVTCYLQPFAV
Sb022746_Sorbi1 LPGTSS--SDDWQKKPSPSVGAKRALDDTRSEASG--TSSPATAADLD------------
gm028044_Glyma1 ------------------------------------------------------------
pt001236_POPTR_ LPGTATEQLEKQTPNSNVTKSNKRSLPDMNEDSAGRRESSSVSSNDKK------------
gm055370_Glyma2 LPGTE--ESEEKTLSAGARINNKRPLTETSDECA----SNGTSSAPHE------------
                                                                            

AT1G04240.1     -----------KTETSP--------------------------PRKA--------QIVGW
gm002569_Glyma0 SGVRHVSVSVSDTDTRPCQCRCRCFIGYMSLHVYGLFCLILHLPLESLYGKYQMAKIVGW
Sb022746_Sorbi1 --LDH------DHDAAP--------------------------PPKA--------QVVGW
gm028044_Glyma1 ------------------------------------------------------------
pt001236_POPTR_ ---SH------EQETAP--------------------------PTKT--------QVVGW
gm055370_Glyma2 -----------KTETAP--------------------------PAKT--------KIVGW
                                                                            

AT1G04240.1     PPVRSYRKNNIQS------KKNESE-HEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLK
gm002569_Glyma0 PPIRSYRKQSLQ------------EGDQGDGIYVKVIMDGAPYLRKIDLKVYRGYPELLK
Sb022746_Sorbi1 PPVRAYRKNTFQAAAAAAKKADQQQQQQGGGLYVKVSMDGAPYLRKVDLRMYKGYRELRE
gm028044_Glyma1 -------------------------------------MDGAPYLRKIDLKVYGGYTQLLK
pt001236_POPTR_ PPIRSYRKNCLQA------RK--LE-AEAAGLYVKVSMDGAPYLRKIDLKVYKGYPELLE
gm055370_Glyma2 PPIRSYRKNSLQ------------E-SEGAGIYVKVSMDGAPYLRKIDLKVYGGYTQLLK
                                                     *********:**  * ** :* :

AT1G04240.1     ALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSE
gm002569_Glyma0 ALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFMTSCKRLRVMKGSE
Sb022746_Sorbi1 ALDALFTKSFSAAAAEGG--DHQHAIAYEDKDGDLMLVGDVPWDMFISSCKKLRIMKGSE
gm028044_Glyma1 ALENMFKLTIGEYSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSE
pt001236_POPTR_ VVEEMFKFKVGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWEMFINSCKRLRIMKESE
gm055370_Glyma2 SLENMFKLTIGEHSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFVTSCRRLRIMKGSE
                 :: :*. ...    . *  . :.. :******* **:*****:**: :*::**:** **

AT1G04240.1     AKGLGCGV
gm002569_Glyma0 ARGLGCGV
Sb022746_Sorbi1 AR------
gm028044_Glyma1 ARGLGCAV
pt001236_POPTR_ ARGLGCAV
gm055370_Glyma2 ARGLGCAV
                *:
BoxShade v3.31 C (beta, 970507) Output
AT1G04240.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D - - - - E F - - - - - - - - - - - V N L K E T E L R L G
gm002569_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E - S R V V F E N D - - - - - - - - L N L K A T E L R L G
Sb022746_Sorbi1    S P R L H P H L L L I L I L L S L S I S R A S K N A A S S Y L A - S K Q A F S S D S F M E I V D A D N L S A T E L R L G
gm028044_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt001236_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E - - - - - F E R D - - - - - - - - L N L E A T E L R L G
gm055370_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E N T T V T Y Q T D - - - - - - - - L N L K A T E L R L G
 
AT1G04240.1     L P G T D N - V C E A K E R V S C C N N N N K R V L S T D T E K E I - - - E S S S R - - - - - - - - - - - - - - - - - -
gm002569_Glyma0    L P G T - - - - - E D K T V H A I S I R N N K R Q V P E T S Q E S V - - - - S I S K A S P D Q H F V V T C Y L Q P F A V
Sb022746_Sorbi1    L P G T S S - - S D D W Q K K P S P S V G A K R A L D D T R S E A S G - - T S S P A T A A D L D - - - - - - - - - - - -
gm028044_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt001236_POPTR_    L P G T A T E Q L E K Q T P N S N V T K S N K R S L P D M N E D S A G R R E S S S V S S N D K K - - - - - - - - - - - -
gm055370_Glyma2    L P G T E - - E S E E K T L S A G A R I N N K R P L T E T S D E C A - - - - S N G T S S A P H E - - - - - - - - - - - -
 
AT1G04240.1     - - - - - - - - - - - K T E T S P - - - - - - - - - - - - - - - - - - - - - - - - - - P R K A - - - - - - - - Q I V G W
gm002569_Glyma0    S G V R H V S V S V S D T D T R P C Q C R C R C F I G Y M S L H V Y G L F C L I L H L P L E S L Y G K Y Q M A K I V G W
Sb022746_Sorbi1    - - L D H - - - - - - D H D A A P - - - - - - - - - - - - - - - - - - - - - - - - - - P P K A - - - - - - - - Q V V G W
gm028044_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt001236_POPTR_    - - - S H - - - - - - E Q E T A P - - - - - - - - - - - - - - - - - - - - - - - - - - P T K T - - - - - - - - Q V V G W
gm055370_Glyma2    - - - - - - - - - - - K T E T A P - - - - - - - - - - - - - - - - - - - - - - - - - - P A K T - - - - - - - - K I V G W
 
AT1G04240.1     P P V R S Y R K N N I Q S - - - - - - K K N E S E - H E G Q G I Y V K V S M D G A P Y L R K I D L S C Y K G Y S E L L K
gm002569_Glyma0    P P I R S Y R K Q S L Q - - - - - - - - - - - - E G D Q G D G I Y V K V I M D G A P Y L R K I D L K V Y R G Y P E L L K
Sb022746_Sorbi1    P P V R A Y R K N T F Q A A A A A A K K A D Q Q Q Q Q Q G G G L Y V K V S M D G A P Y L R K V D L R M Y K G Y R E L R E
gm028044_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D G A P Y L R K I D L K V Y G G Y T Q L L K
pt001236_POPTR_    P P I R S Y R K N C L Q A - - - - - - R K - - L E - A E A A G L Y V K V S M D G A P Y L R K I D L K V Y K G Y P E L L E
gm055370_Glyma2    P P I R S Y R K N S L Q - - - - - - - - - - - - E - S E G A G I Y V K V S M D G A P Y L R K I D L K V Y G G Y T Q L L K
 
AT1G04240.1     A L E V M F K F S V G E Y F E R D G Y K G S D F V P T Y E D K D G D W M L I G D V P W E M F I C T C K R L R I M K G S E
gm002569_Glyma0    A L E T M F K L T I G E Y S E R E G Y K G S E Y A P T Y E D K D G D W M L V G D V P W D M F M T S C K R L R V M K G S E
Sb022746_Sorbi1    A L D A L F T K S F S A A A A E G G - - D H Q H A I A Y E D K D G D L M L V G D V P W D M F I S S C K K L R I M K G S E
gm028044_Glyma1    A L E N M F K L T I G E Y S E K E G Y K G S D Y A P T Y E D K D G D W M L V G D V P W D M F V T S C K R L R I M K G S E
pt001236_POPTR_    V V E E M F K F K V G E Y S E R E G Y N G S E Y V P T Y E D K D G D W M L V G D V P W E M F I N S C K R L R I M K E S E
gm055370_Glyma2    S L E N M F K L T I G E H S E K E G Y K G S D Y A P T Y E D K D G D W M L V G D V P W D M F V T S C R R L R I M K G S E
 
AT1G04240.1     A K G L G C G V
gm002569_Glyma0    A R G L G C G V
Sb022746_Sorbi1    A R - - - - - -
gm028044_Glyma1    A R G L G C A V
pt001236_POPTR_    A R G L G C A V
gm055370_Glyma2    A R G L G C A V
 
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