fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04240.1 NLKETELRLGLPGTDN at 10/189 in AT1G04240.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041780 NLKATELRLGLPGTEE in 8/197 AT1G04240.1 1st_1st 0.440506329 Ia
Sb031862 not found in 461aa AT1G04240.1 1st_1st 0.427848101 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04240.1     -------------------MDEFVNLKETELRLGLPGTDNVCE-----------------
Os041780_Os12t0 ----------------------MENLKATELRLGLPGTEEE-------------------
Sb031862_Sorbi1 GEAMEVAAASAAASFGLKAADDVDNLRATELRLGLPGTEEEPQQVHKATAAAAAVELPLL
                                      . **: **********::                    

AT1G04240.1     ----AKERVSCCNNNNKRVLSTDTEK---EIESSSRKTETSPPRKAQIVGWPPVRSYRKN
Os041780_Os12t0 ----AAPPPSTPRAGSKRALAGEPDQ---------AKIKPAAAAKAQVVGWPPVRSYRKS
Sb031862_Sorbi1 PAATTPPAPSTPR-GKKRDVVGSGNEDAPKKRDGNADAAP-PAAKAQVVGWPPVRSYRKS
                    :    *  . ..** :  . ::          .  . .. ***:***********.

AT1G04240.1     NIQSKKNESEHEGQ--------------------GIYVKVSMDGAPYLRKIDLSCYKGYS
Os041780_Os12t0 CL--QPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYLRKIDLKVYKGYR
Sb031862_Sorbi1 CFQQQQQQAAAKSKPAPAAPAEE-------APATGLFVKVSMDGAPYLRKVDLKMYKGYR
                 :  :   :  :.:                    *::*************:**. **** 

AT1G04240.1     ELLKALEVMFK-FSV-GEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLR
Os041780_Os12t0 ELREALEAMFLCFSG-GAAADA-AVNPSDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLR
Sb031862_Sorbi1 ELREALEAMFLCFSGSGGSADAPAVNPSDFAVTYEDKDGDLMLVGDVPFDMFISTCKRLR
                ** :***.**  **  *   :  . : ***. ******** **:****::***.******

AT1G04240.1     IMKGSEAKGLGCGV--
Os041780_Os12t0 IMKGSEARGLGATRG-
Sb031862_Sorbi1 IMKGSEARGLGSVKNN
                *******:***.
BoxShade v3.31 C (beta, 970507) Output
AT1G04240.1     - - - - - - - - - - - - - - - - - - - M D E F V N L K E T E L R L G L P G T D N V C E - - - - - - - - - - - - - - - - -
Os041780_Os12t0    - - - - - - - - - - - - - - - - - - - - - - M E N L K A T E L R L G L P G T E E E - - - - - - - - - - - - - - - - - - -
Sb031862_Sorbi1    G E A M E V A A A S A A A S F G L K A A D D V D N L R A T E L R L G L P G T E E E P Q Q V H K A T A A A A A V E L P L L
 
AT1G04240.1     - - - - A K E R V S C C N N N N K R V L S T D T E K - - - E I E S S S R K T E T S P P R K A Q I V G W P P V R S Y R K N
Os041780_Os12t0    - - - - A A P P P S T P R A G S K R A L A G E P D Q - - - - - - - - - A K I K P A A A A K A Q V V G W P P V R S Y R K S
Sb031862_Sorbi1    P A A T T P P A P S T P R - G K K R D V V G S G N E D A P K K R D G N A D A A P - P A A K A Q V V G W P P V R S Y R K S
 
AT1G04240.1     N I Q S K K N E S E H E G Q - - - - - - - - - - - - - - - - - - - - G I Y V K V S M D G A P Y L R K I D L S C Y K G Y S
Os041780_Os12t0    C L - - Q P T T T T T K S K P P P A A A A A E T Q Q K E D V A G A G G L F V K V S M D G A P Y L R K I D L K V Y K G Y R
Sb031862_Sorbi1    C F Q Q Q Q Q Q A A A K S K P A P A A P A E E - - - - - - - A P A T G L F V K V S M D G A P Y L R K V D L K M Y K G Y R
 
AT1G04240.1     E L L K A L E V M F K - F S V - G E Y F E R D G Y K G S D F V P T Y E D K D G D W M L I G D V P W E M F I C T C K R L R
Os041780_Os12t0    E L R E A L E A M F L C F S G - G A A A D A - A V N P S D F A V T Y E D K D G D L M L V G D V P F E M F I S T C K R L R
Sb031862_Sorbi1    E L R E A L E A M F L C F S G S G G S A D A P A V N P S D F A V T Y E D K D G D L M L V G D V P F D M F I S T C K R L R
 
AT1G04240.1     I M K G S E A K G L G C G V - -
Os041780_Os12t0    I M K G S E A R G L G A T R G -
Sb031862_Sorbi1    I M K G S E A R G L G S V K N N
 
0