fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04240.1 NLKETELRLGLPGTDN at 10/189 in AT1G04240.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022746 not found in 372aa AT1G04240.1 not_1st 0.422784810 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04240.1     --------------------------------------MDEFV------NLKETELRLGL
Sb022746_Sorbi1 SPRLHPHLLLILILLSLSISRASKNAASSYLASKQAFSSDSFMEIVDADNLSATELRLGL
                                                       *.*:      **. *******

AT1G04240.1     PGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKT-----------ETSPPRKAQI
Sb022746_Sorbi1 PGTSSSDDWQKKPS-PSVGAKRALD-DTRSEASGTSSPATAADLDLDHDHDAAPPPKAQV
                ***..  : ::: *  . . **.*. **..* ..:*  :           :::** ***:

AT1G04240.1     VGWPPVRSYRKNNIQ-----SKK--NESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSE
Sb022746_Sorbi1 VGWPPVRAYRKNTFQAAAAAAKKADQQQQQQGGGLYVKVSMDGAPYLRKVDLRMYKGYRE
                *******:****.:*     :**  ::.:::* *:**************:**  **** *

AT1G04240.1     LLKALEVMFKFSVGEYFERDGYKGSD--FVPTYEDKDGDWMLIGDVPWEMFICTCKRLRI
Sb022746_Sorbi1 LREALDALFTKS----FSAAAAEGGDHQHAIAYEDKDGDLMLVGDVPWDMFISSCKKLRI
                * :**:.:*. *    *.  . :*.*  .. :******* **:*****:***.:**:***

AT1G04240.1     MKGSEAKGLGCGV
Sb022746_Sorbi1 MKGSEAR------
                ******:
BoxShade v3.31 C (beta, 970507) Output
AT1G04240.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D E F V - - - - - - N L K E T E L R L G L
Sb022746_Sorbi1    S P R L H P H L L L I L I L L S L S I S R A S K N A A S S Y L A S K Q A F S S D S F M E I V D A D N L S A T E L R L G L
 
AT1G04240.1     P G T D N V C E A K E R V S C C N N N N K R V L S T D T E K E I E S S S R K T - - - - - - - - - - - E T S P P R K A Q I
Sb022746_Sorbi1    P G T S S S D D W Q K K P S - P S V G A K R A L D - D T R S E A S G T S S P A T A A D L D L D H D H D A A P P P K A Q V
 
AT1G04240.1     V G W P P V R S Y R K N N I Q - - - - - S K K - - N E S E H E G Q G I Y V K V S M D G A P Y L R K I D L S C Y K G Y S E
Sb022746_Sorbi1    V G W P P V R A Y R K N T F Q A A A A A A K K A D Q Q Q Q Q Q G G G L Y V K V S M D G A P Y L R K V D L R M Y K G Y R E
 
AT1G04240.1     L L K A L E V M F K F S V G E Y F E R D G Y K G S D - - F V P T Y E D K D G D W M L I G D V P W E M F I C T C K R L R I
Sb022746_Sorbi1    L R E A L D A L F T K S - - - - F S A A A A E G G D H Q H A I A Y E D K D G D L M L V G D V P W D M F I S S C K K L R I
 
AT1G04240.1     M K G S E A K G L G C G V
Sb022746_Sorbi1    M K G S E A R - - - - - -
 
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