fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04240.1 NLKETELRLGLPGTDN at 10/189 in AT1G04240.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031862 not found in 461aa AT1G04240.1 1st_1st 0.427848101 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04240.1     -------------------MDEFVNLKETELRLGLPGTDNVCEAKERV------------
Sb031862_Sorbi1 GEAMEVAAASAAASFGLKAADDVDNLRATELRLGLPGTE---EEPQQVHKATAAAAAVEL
                                    *:. **: **********:   *  ::*            

AT1G04240.1     ------------SCCNNNNKRVLSTDTEKEIESSSRKTETSPP-RKAQIVGWPPVRSYRK
Sb031862_Sorbi1 PLLPAATTPPAPSTPRGKKRDVVGSGNEDAPKKRDGNADAAPPAAKAQVVGWPPVRSYRK
                            *  ..::: *:.:..*.  :. . :::::**  ***:***********

AT1G04240.1     NNIQSKKNES-------------EHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKAL
Sb031862_Sorbi1 SCFQQQQQQAAAKSKPAPAAPAEEAPATGLFVKVSMDGAPYLRKVDLKMYKGYRELREAL
                . :*.:::::             *  . *::*************:**. **** ** :**

AT1G04240.1     EVMFK-FS-VGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSE
Sb031862_Sorbi1 EAMFLCFSGSGGSADAPAVNPSDFAVTYEDKDGDLMLVGDVPFDMFISTCKRLRIMKGSE
                *.**  **  *   :  . : ***. ******** **:****::***.************

AT1G04240.1     AKGLGCGV--
Sb031862_Sorbi1 ARGLGSVKNN
                *:***.
BoxShade v3.31 C (beta, 970507) Output
AT1G04240.1     - - - - - - - - - - - - - - - - - - - M D E F V N L K E T E L R L G L P G T D N V C E A K E R V - - - - - - - - - - - -
Sb031862_Sorbi1    G E A M E V A A A S A A A S F G L K A A D D V D N L R A T E L R L G L P G T E - - - E E P Q Q V H K A T A A A A A V E L
 
AT1G04240.1     - - - - - - - - - - - - S C C N N N N K R V L S T D T E K E I E S S S R K T E T S P P - R K A Q I V G W P P V R S Y R K
Sb031862_Sorbi1    P L L P A A T T P P A P S T P R G K K R D V V G S G N E D A P K K R D G N A D A A P P A A K A Q V V G W P P V R S Y R K
 
AT1G04240.1     N N I Q S K K N E S - - - - - - - - - - - - - E H E G Q G I Y V K V S M D G A P Y L R K I D L S C Y K G Y S E L L K A L
Sb031862_Sorbi1    S C F Q Q Q Q Q Q A A A K S K P A P A A P A E E A P A T G L F V K V S M D G A P Y L R K V D L K M Y K G Y R E L R E A L
 
AT1G04240.1     E V M F K - F S - V G E Y F E R D G Y K G S D F V P T Y E D K D G D W M L I G D V P W E M F I C T C K R L R I M K G S E
Sb031862_Sorbi1    E A M F L C F S G S G G S A D A P A V N P S D F A V T Y E D K D G D L M L V G D V P F D M F I S T C K R L R I M K G S E
 
AT1G04240.1     A K G L G C G V - -
Sb031862_Sorbi1    A R G L G S V K N N
 
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