fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04240.1 NLKETELRLGLPGTDN at 10/189 in AT1G04240.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031862 not found in 461aa AT1G04240.1 1st_1st 0.427848101 Ia
Sb022746 not found in 372aa AT1G04240.1 not_1st 0.422784810 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04240.1     --------------------------------------MDEFV------NLKETELRLGL
Sb031862_Sorbi1 -------------------GEAMEVAAASAAASFGLKAAD------DVDNLRATELRLGL
Sb022746_Sorbi1 SPRLHPHLLLILILLSLSISRASKNAASSYLASKQAFSSDSFMEIVDADNLSATELRLGL
                                                       *         **  *******

AT1G04240.1     PGTDNVCEAKERVSCCN---------------------NNNKRVLSTDTEKEIESSSRKT
Sb031862_Sorbi1 PGTEEEPQQVHKATAAAAAVELPLLPAATTPPAPSTPRGKKRDVVGSGNE----DAPKKR
Sb022746_Sorbi1 PGTSSSDDWQKK-------------------PSPSV--GAKRALDDTRSEASGTSSPATA
                ***..  :  .:                          . :: : .: .*    .:. . 

AT1G04240.1     ---------ETSPP-RKAQIVGWPPVRSYRKNNIQ-----SKK--NESEHEGQ-------
Sb031862_Sorbi1 -----DGNADAAPPAAKAQVVGWPPVRSYRKSCFQ----------QQQQQAAAKSKPAPA
Sb022746_Sorbi1 ADLDLDHDHDAAPP-PKAQVVGWPPVRAYRKNTFQAAAAAAKKADQQQQQQGG-------
                         :::**  ***:*******:***. :*          ::.:: .        

AT1G04240.1     ---------GIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKG
Sb031862_Sorbi1 APAEEAPATGLFVKVSMDGAPYLRKVDLKMYKGYRELREALEAMFLCFSGSGGSADAPAV
Sb022746_Sorbi1 ---------GLYVKVSMDGAPYLRKVDLRMYKGYRELREALDALFT----KSFSAAAAEG
                         *::*************:**  **** ** :**:.:*     .  .  .   

AT1G04240.1     --SDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGLGCGV--
Sb031862_Sorbi1 NPSDFAVTYEDKDGDLMLVGDVPFDMFISTCKRLRIMKGSEARGLGSVKNN
Sb022746_Sorbi1 GDHQHAIAYEDKDGDLMLVGDVPWDMFISSCKKLRIMKGSEAR--------
                   :.. :******* **:****::***.:**:*********:
BoxShade v3.31 C (beta, 970507) Output
AT1G04240.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D E F V - - - - - - N L K E T E L R L G L
Sb031862_Sorbi1    - - - - - - - - - - - - - - - - - - - G E A M E V A A A S A A A S F G L K A A D - - - - - - D V D N L R A T E L R L G L
Sb022746_Sorbi1    S P R L H P H L L L I L I L L S L S I S R A S K N A A S S Y L A S K Q A F S S D S F M E I V D A D N L S A T E L R L G L
 
AT1G04240.1     P G T D N V C E A K E R V S C C N - - - - - - - - - - - - - - - - - - - - - N N N K R V L S T D T E K E I E S S S R K T
Sb031862_Sorbi1    P G T E E E P Q Q V H K A T A A A A A V E L P L L P A A T T P P A P S T P R G K K R D V V G S G N E - - - - D A P K K R
Sb022746_Sorbi1    P G T S S S D D W Q K K - - - - - - - - - - - - - - - - - - - P S P S V - - G A K R A L D D T R S E A S G T S S P A T A
 
AT1G04240.1     - - - - - - - - - E T S P P - R K A Q I V G W P P V R S Y R K N N I Q - - - - - S K K - - N E S E H E G Q - - - - - - -
Sb031862_Sorbi1    - - - - - D G N A D A A P P A A K A Q V V G W P P V R S Y R K S C F Q - - - - - - - - - - Q Q Q Q Q A A A K S K P A P A
Sb022746_Sorbi1    A D L D L D H D H D A A P P - P K A Q V V G W P P V R A Y R K N T F Q A A A A A A K K A D Q Q Q Q Q Q G G - - - - - - -
 
AT1G04240.1     - - - - - - - - - G I Y V K V S M D G A P Y L R K I D L S C Y K G Y S E L L K A L E V M F K F S V G E Y F E R D G Y K G
Sb031862_Sorbi1    A P A E E A P A T G L F V K V S M D G A P Y L R K V D L K M Y K G Y R E L R E A L E A M F L C F S G S G G S A D A P A V
Sb022746_Sorbi1    - - - - - - - - - G L Y V K V S M D G A P Y L R K V D L R M Y K G Y R E L R E A L D A L F T - - - - K S F S A A A A E G
 
AT1G04240.1     - - S D F V P T Y E D K D G D W M L I G D V P W E M F I C T C K R L R I M K G S E A K G L G C G V - -
Sb031862_Sorbi1    N P S D F A V T Y E D K D G D L M L V G D V P F D M F I S T C K R L R I M K G S E A R G L G S V K N N
Sb022746_Sorbi1    G D H Q H A I A Y E D K D G D L M L V G D V P W D M F I S S C K K L R I M K G S E A R - - - - - - - -
 
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