fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04250.1 NLRETELCLGLPGGDT at 12/229 in AT1G04250.1
FSETVDLKLNLNNEPA at 38/229 in AT1G04250.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041779 AFEATELRLGLPGGGG in 11/277 AT3G23050.1 1st_not 0.522935779 II
FAETIDLKLKLEPAAA in 44/277
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04250.1     MMGSVELNLRETELCLGLPG----GDTVAPV---TGNKRGFSETVDLKLNLNNEPA----
Os041779_Os12t0 --MAADLAFEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETIDLKLKL--EPAAAAV
                   :.:* :. *** *****    **:.*..   :..****:**:****:*  ***    

AT1G04250.1     ----NKEGSTTH------DVVTFDSKEKS--------------------ACPKDPAKPPA
Os041779_Os12t0 DDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRA
                    :** :::.      *:*  *..: *                    :.. ** ** *

AT1G04250.1     -KAQVVGWPPVRSYRKNVMV------------SCQKSSGGPEAAAFVKVSMDGAPYLRKI
Os041779_Os12t0 PKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKV
                 ****************::.            . :**..*. *****************:

AT1G04250.1     DLRMYKSYDELSNALSNMFSSFTMGK---HGGEEGMIDFMNERKLMDLVNSWDYVPSYED
Os041779_Os12t0 DLKMYKSYLELSKALEKMFSSFTIGNCGSHG-----VNGMNESKIADLLNGSEYVPTYED
                **:***** ***:**.:******:*:   **     :: *** *: **:*. :***:***

AT1G04250.1     KDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA
Os041779_Os12t0 KDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS
                ************* ***::*****:****:*************.*:
BoxShade v3.31 C (beta, 970507) Output
AT1G04250.1     M M G S V E L N L R E T E L C L G L P G - - - - G D T V A P V - - - T G N K R G F S E T V D L K L N L N N E P A - - - -
Os041779_Os12t0    - - M A A D L A F E A T E L R L G L P G G G G D G D A A A A A A R S S S G K R G F A E T I D L K L K L - - E P A A A A V
 
AT1G04250.1     - - - - N K E G S T T H - - - - - - D V V T F D S K E K S - - - - - - - - - - - - - - - - - - - - A C P K D P A K P P A
Os041779_Os12t0    D D D D D K E E A A A D D R E K K V D I V G A D N D D A S P P A A A A A G G M K R S P S Q S S V V T A A A D P E K P R A
 
AT1G04250.1     - K A Q V V G W P P V R S Y R K N V M V - - - - - - - - - - - - S C Q K S S G G P E A A A F V K V S M D G A P Y L R K I
Os041779_Os12t0    P K A Q V V G W P P V R S Y R K N I L A V Q A D K G K D A A D G G G D K S G A G A A A A A F V K V S M D G A P Y L R K V
 
AT1G04250.1     D L R M Y K S Y D E L S N A L S N M F S S F T M G K - - - H G G E E G M I D F M N E R K L M D L V N S W D Y V P S Y E D
Os041779_Os12t0    D L K M Y K S Y L E L S K A L E K M F S S F T I G N C G S H G - - - - - V N G M N E S K I A D L L N G S E Y V P T Y E D
 
AT1G04250.1     K D G D W M L V G D V P W P M F V D T C K R L R L M K G S D A I G L A P R A M E K C K S R A
Os041779_Os12t0    K D G D W M L V G D V P W E M F V E S C K R L R I M K G S E A I G L A P R A M E K C K N R S
 
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