fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04250.1 NLRETELCLGLPGGDT at 12/229 in AT1G04250.1
FSETVDLKLNLNNEPA at 38/229 in AT1G04250.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031861 not found in 502aa AT3G04730.1 1st_not 0.525229357 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04250.1     ------------------------MMGSVELNLRETELCLGLPGGDTVAPVTGNKRG---
Sb031861_Sorbi1 LDEHLPRHVADEHPVAVLVLVGRHVLGAVE-QIHQLALVHAV---HPLRPTASNGEGAEH
                                        ::*:** ::::  *  .:   ..: *.:.* .*   

AT1G04250.1     --------FSETVDLKLNLNN-----EPANKEGSTT------------------------
Sb031861_Sorbi1 LLERLGQLLVALVHLEVHLAQVRRAVQAHLHERRTTASCRRRRGLVGVFAAAGALVGLHG
                        :   *.*:::* :     :.  :*  **                        

AT1G04250.1     HDVVTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAAAFVK--
Sb031861_Sorbi1 HDVL----------PERPDRWPSHHLSLG-------GARLLGGVSLHGGGGDDAALARGP
                ***:          *: * : *::   :*         .:: . .  .** : **:.:  

AT1G04250.1     --VSMDGAPY---------------------LRKID-------LRMYKSYDELSNA----
Sb031861_Sorbi1 LHLPADGGLLRGGHAAGVFLGGGNTVLMLVRLRRLQYGRGSRRLQLQLEVDGLCEAPLPG
                  :. **.                       **:::       *::  . * *.:*    

AT1G04250.1     -------LSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGD
Sb031861_Sorbi1 GDDRAPPFADHLSP-AAGQAQTELRLLEPQVRRRHCCCRRHW---PSSSPLGSRLLLL--
                       ::: :*. : *:   *  :::   .*:     . *   ** .  ..  :*:  

AT1G04250.1     VPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA--------------
Sb031861_Sorbi1 ---PCFCFVCFALLASQDEEAGWLC-----KCKGGGFANARGLGRGATTT
                   * *  .*  *   :..:*  *.     ***. .
BoxShade v3.31 C (beta, 970507) Output
AT1G04250.1     - - - - - - - - - - - - - - - - - - - - - - - - M M G S V E L N L R E T E L C L G L P G G D T V A P V T G N K R G - - -
Sb031861_Sorbi1    L D E H L P R H V A D E H P V A V L V L V G R H V L G A V E - Q I H Q L A L V H A V - - - H P L R P T A S N G E G A E H
 
AT1G04250.1     - - - - - - - - F S E T V D L K L N L N N - - - - - E P A N K E G S T T - - - - - - - - - - - - - - - - - - - - - - - -
Sb031861_Sorbi1    L L E R L G Q L L V A L V H L E V H L A Q V R R A V Q A H L H E R R T T A S C R R R R G L V G V F A A A G A L V G L H G
 
AT1G04250.1     H D V V T F D S K E K S A C P K D P A K P P A K A Q V V G W P P V R S Y R K N V M V S C Q K S S G G P E A A A F V K - -
Sb031861_Sorbi1    H D V L - - - - - - - - - - P E R P D R W P S H H L S L G - - - - - - - G A R L L G G V S L H G G G G D D A A L A R G P
 
AT1G04250.1     - - V S M D G A P Y - - - - - - - - - - - - - - - - - - - - - L R K I D - - - - - - - L R M Y K S Y D E L S N A - - - -
Sb031861_Sorbi1    L H L P A D G G L L R G G H A A G V F L G G G N T V L M L V R L R R L Q Y G R G S R R L Q L Q L E V D G L C E A P L P G
 
AT1G04250.1     - - - - - - - L S N M F S S F T M G K H G G E E G M I D F M N E R K L M D L V N S W D Y V P S Y E D K D G D W M L V G D
Sb031861_Sorbi1    G D D R A P P F A D H L S P - A A G Q A Q T E L R L L E P Q V R R R H C C C R R H W - - - P S S S P L G S R L L L L - -
 
AT1G04250.1     V P W P M F V D T C K R L R L M K G S D A I G L A P R A M E K C K S R A - - - - - - - - - - - - - -
Sb031861_Sorbi1    - - - P C F C F V C F A L L A S Q D E E A G W L C - - - - - K C K G G G F A N A R G L G R G A T T T
 
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