fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04250.1 NLRETELCLGLPGGDT at 12/229 in AT1G04250.1
FSETVDLKLNLNNEPA at 38/229 in AT1G04250.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020598 GFEETELRLGLPGGND in 10/369 AT3G04730.1 not_not 0.474770642 III
FEETIDLKLKLEQPAA in 37/369
Sb020260 NPTSISLSLSLSLSLS in 15/490 AT3G04730.1 not_not 0.454128440 III
LSLSLSLSLSLLLPSP in 31/490
VDVGTELRLGLPGGGA in 155/490
FEDTIDLKLKLPTAGM in 180/490
Sb033829 AAAATELRLGLPGTEE in 21/348 AT4G29080.1 not_not 0.401376146 III
YKNYKDLSLALEKMFS in 156/348
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04250.1     -----------------------------------MMGS-VELNLR---ETELCLGLP--
Sb020260_Sorbi1 RGGAQGERDNDGRDRLASNQLLAPAEP------KPMAGADVDVG------TELRLGLP--
Sb033829_Sorbi1 -MAPPQEQDYIG---------LSPA----------AAAA-----------TELRLGLPGT
Sb020598_Sorbi1 -GGPRVRGD------------RAPARPARRQRRRGCRGG-EEAGFRGDHRPQAEAGAA--
                                                     ..           .:   * .  

AT1G04250.1     ----GGDTVA---------PVTGN--------KRGFSETVDLKLNLNNEPANKEGSTTHD
Sb020260_Sorbi1 ----GGGAEA----------AKAA--------KRGFEDTIDLKLKLPTAGMEEAAAAKPE
Sb033829_Sorbi1 EEADGGEAAAGTPLTLELLPKGGA--------KRGFTDAI--------------------
Sb020598_Sorbi1 ----GGAALG---------EGGGGWRWRRRRPRRGPTVVASSSQHRRRRYGHEEVA---E
                    ** : .            .         :**   .                     

AT1G04250.1     VVTFDSKEKSACP-KDPA------KP----------PA-KAQVVGWPPVRSYRKNVM-VS
Sb020260_Sorbi1 PAAEKAKRPAEAPAADAE------KP----------PAPKAQAVGWPPVRSYRRNVMTVQ
Sb033829_Sorbi1 -VRREAAARGKAPAEDEEVDKKKTQA----------PAAKAQVVGWPPIRSYRKNTMAMN
Sb020598_Sorbi1 PEQRGHRRRAAGP-------RKASRPQGTGGGLAARPVVPQEHPGRPIPEKWRRRQGQRR
                         .  *           :.          *.   :  * *  ..:*:.     

AT1G04250.1     --CQKSSGGPE--------------AAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSN
Sb020260_Sorbi1 --SVKSKKEEEPEKQQSAAANASGNSSAFVKVSMDGAPYLRKVDLKMYNSYKDLSIALKK
Sb033829_Sorbi1 QPTLKTKDDGE-------AKQALVQDCLYVKVSMDGAPYLRKVDLKMYKNYKDLSLALEK
Sb020598_Sorbi1 Q-DVTGVREGE-HGRRAVPAQGGPEDVRELPGAVQGAPE----DVQLLH-HRQLRAA---
                    .     *                  :  :::***     *::: : : :*  *   

AT1G04250.1     MFSSFTMG-----KHGGEEGMIDFMNE--RKLMDLVNSW----------------DYVPS
Sb020260_Sorbi1 MFSTFTTS-----GNN--------MNE--GKLVDPVSGA----------------DVVTT
Sb033829_Sorbi1 MFSCFTVGHSESNGKSGREG----LSD--CRLMDHKNGT----------------ELVLT
Sb020598_Sorbi1 -------GDDER-GDEAAGG----PSERLRRLLAHVRGQGRRLDARRRRPLGDVRGVVQA
                       .      .          .:   :*:    .                   * :

AT1G04250.1     YEDKD----------GDWMLVGDVPWPMFVDT--C------KRLRLMKGSDAIGLAPRAM
Sb020260_Sorbi1 YEDKD----------GDWMLVGDVPWEMFVES--C------KRLRIMKSSEAIGLAPRTK
Sb033829_Sorbi1 YKDKD----------GDWMLVGDVPWRMFTGS--C------RRLRIMKGSDAVGLAPRVS
Sb020598_Sorbi1 PPDHERIGSRRPRTQGD----GQVQQQLLSKAYYCGNASVSSRYQLTATVDNVLLLLLLH
                  *::          **    *:*   ::  :  *       * ::    : : *     

AT1G04250.1     EKCKSRA
Sb020260_Sorbi1 DKCKNKS
Sb033829_Sorbi1 DKSKNG-
Sb020598_Sorbi1 SVS----
                . .
BoxShade v3.31 C (beta, 970507) Output
AT1G04250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M M G S - V E L N L R - - - E T E L C L G L P - -
Sb020260_Sorbi1    R G G A Q G E R D N D G R D R L A S N Q L L A P A E P - - - - - - K P M A G A D V D V G - - - - - - T E L R L G L P - -
Sb033829_Sorbi1    - M A P P Q E Q D Y I G - - - - - - - - - L S P A - - - - - - - - - - A A A A - - - - - - - - - - - T E L R L G L P G T
Sb020598_Sorbi1    - G G P R V R G D - - - - - - - - - - - - R A P A R P A R R Q R R R G C R G G - E E A G F R G D H R P Q A E A G A A - -
 
AT1G04250.1     - - - - G G D T V A - - - - - - - - - P V T G N - - - - - - - - K R G F S E T V D L K L N L N N E P A N K E G S T T H D
Sb020260_Sorbi1    - - - - G G G A E A - - - - - - - - - - A K A A - - - - - - - - K R G F E D T I D L K L K L P T A G M E E A A A A K P E
Sb033829_Sorbi1    E E A D G G E A A A G T P L T L E L L P K G G A - - - - - - - - K R G F T D A I - - - - - - - - - - - - - - - - - - - -
Sb020598_Sorbi1    - - - - G G A A L G - - - - - - - - - E G G G G W R W R R R R P R R G P T V V A S S S Q H R R R R Y G H E E V A - - - E
 
AT1G04250.1     V V T F D S K E K S A C P - K D P A - - - - - - K P - - - - - - - - - - P A - K A Q V V G W P P V R S Y R K N V M - V S
Sb020260_Sorbi1    P A A E K A K R P A E A P A A D A E - - - - - - K P - - - - - - - - - - P A P K A Q A V G W P P V R S Y R R N V M T V Q
Sb033829_Sorbi1    - V R R E A A A R G K A P A E D E E V D K K K T Q A - - - - - - - - - - P A A K A Q V V G W P P I R S Y R K N T M A M N
Sb020598_Sorbi1    P E Q R G H R R R A A G P - - - - - - - R K A S R P Q G T G G G L A A R P V V P Q E H P G R P I P E K W R R R Q G Q R R
 
AT1G04250.1     - - C Q K S S G G P E - - - - - - - - - - - - - - A A A F V K V S M D G A P Y L R K I D L R M Y K S Y D E L S N A L S N
Sb020260_Sorbi1    - - S V K S K K E E E P E K Q Q S A A A N A S G N S S A F V K V S M D G A P Y L R K V D L K M Y N S Y K D L S I A L K K
Sb033829_Sorbi1    Q P T L K T K D D G E - - - - - - - A K Q A L V Q D C L Y V K V S M D G A P Y L R K V D L K M Y K N Y K D L S L A L E K
Sb020598_Sorbi1    Q - D V T G V R E G E - H G R R A V P A Q G G P E D V R E L P G A V Q G A P E - - - - D V Q L L H - H R Q L R A A - - -
 
AT1G04250.1     M F S S F T M G - - - - - K H G G E E G M I D F M N E - - R K L M D L V N S W - - - - - - - - - - - - - - - - D Y V P S
Sb020260_Sorbi1    M F S T F T T S - - - - - G N N - - - - - - - - M N E - - G K L V D P V S G A - - - - - - - - - - - - - - - - D V V T T
Sb033829_Sorbi1    M F S C F T V G H S E S N G K S G R E G - - - - L S D - - C R L M D H K N G T - - - - - - - - - - - - - - - - E L V L T
Sb020598_Sorbi1    - - - - - - - G D D E R - G D E A A G G - - - - P S E R L R R L L A H V R G Q G R R L D A R R R R P L G D V R G V V Q A
 
AT1G04250.1     Y E D K D - - - - - - - - - - G D W M L V G D V P W P M F V D T - - C - - - - - - K R L R L M K G S D A I G L A P R A M
Sb020260_Sorbi1    Y E D K D - - - - - - - - - - G D W M L V G D V P W E M F V E S - - C - - - - - - K R L R I M K S S E A I G L A P R T K
Sb033829_Sorbi1    Y K D K D - - - - - - - - - - G D W M L V G D V P W R M F T G S - - C - - - - - - R R L R I M K G S D A V G L A P R V S
Sb020598_Sorbi1    P P D H E R I G S R R P R T Q G D - - - - G Q V Q Q Q L L S K A Y Y C G N A S V S S R Y Q L T A T V D N V L L L L L L H
 
AT1G04250.1     E K C K S R A
Sb020260_Sorbi1    D K C K N K S
Sb033829_Sorbi1    D K S K N G -
Sb020598_Sorbi1    S V S - - - -
 
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