fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04250.1 NLRETELCLGLPGGDT at 12/229 in AT1G04250.1
FSETVDLKLNLNNEPA at 38/229 in AT1G04250.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031861 not found in 502aa AT3G04730.1 1st_not 0.525229357 II
Sb020598 GFEETELRLGLPGGND in 10/369 AT3G04730.1 not_not 0.474770642 III
FEETIDLKLKLEQPAA in 37/369
Sb020260 NPTSISLSLSLSLSLS in 15/490 AT3G04730.1 not_not 0.454128440 III
LSLSLSLSLSLLLPSP in 31/490
VDVGTELRLGLPGGGA in 155/490
FEDTIDLKLKLPTAGM in 180/490
Sb033829 AAAATELRLGLPGTEE in 21/348 AT4G29080.1 not_not 0.401376146 III
YKNYKDLSLALEKMFS in 156/348
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04250.1     ------------------------------------------------------------
Sb033829_Sorbi1 ---MAPPQEQDY--------IG------------------LSPA----------------
Sb020260_Sorbi1 --RGGAQGERDN--------DGR---------DRLASNQLLAPAEP--------------
Sb031861_Sorbi1 LDEHLPRHVADEHPVAVLVLVGRHVLGAVEQIHQLALVHAVHPLRPTASNGEGAEHLLER
Sb020598_Sorbi1 ---GGPRVRGD-----------------------------RAPARPA-------------
                                                                            

AT1G04250.1     ----------------------------------------MMGS-VELNL----------
Sb033829_Sorbi1 ----------------------------------------AAAA----------------
Sb020260_Sorbi1 --------------------------------------KPMAGADVDVG-----------
Sb031861_Sorbi1 LGQLLVALVHLEVHLAQVRRAVQAHLHERRTTASCRRRRGLVGVFAAAGALVGLHGHDVL
Sb020598_Sorbi1 ----------------------------RR-----QRRRGCRGG-EEAGF----------
                                                          .                 

AT1G04250.1     --R-----ETELCLGLP------GGDTVA---------PVTGN--------KRGFSETVD
Sb033829_Sorbi1 ---------TELRLGLPGTEEADGGEAAAGTPLTLELLPKGGA--------KRGFTDAI-
Sb020260_Sorbi1 ---------TELRLGLP------GGGAEA----------AKAA--------KRGFEDTID
Sb031861_Sorbi1 PERPDRWPSHHLSLGGA---RLLGGVSLH----------GGGG-----------------
Sb020598_Sorbi1 --RGD--HRPQAEAGAA------GGAALG---------EGGGGWRWRRRRPRRGPTVVAS
                          .   * .      ** :              .                  

AT1G04250.1     LKLNLNNEPANKEGSTTHDVVTFDSKEKSACP-KDPA------KP----------PA-KA
Sb033829_Sorbi1 --------------------VRREAAARGKAPAEDEEVDKKKTQA----------PAAKA
Sb020260_Sorbi1 LKLKLPTAGMEEAAAAKPEPAAEKAKRPAEAPAADAE------KP----------PAPKA
Sb031861_Sorbi1 -----------------------DDAALARGP---------LHLP-ADGGLLRGGHAAGV
Sb020598_Sorbi1 SSQHRRRRYGHEEVA---EPEQRGHRRRAAGP-------RKASRPQGTGGGLAARPVVPQ
                                            .  *            .           .   

AT1G04250.1     QVVGWPPV------------RSYRKNVM-VS--CQKSSGGPE--------------AAAF
Sb033829_Sorbi1 QVVGWPPI------------RSYRKNTMAMNQPTLKTKDDGE-------AKQALVQDCLY
Sb020260_Sorbi1 QAVGWPPV------------RSYRRNVMTVQ--SVKSKKEEEPEKQQSAAANASGNSSAF
Sb031861_Sorbi1 FLGGGNTVLMLVRLRRLQYGRGSRRLQLQL---EVDGLCEAP------------------
Sb020598_Sorbi1 EHPGRPIP------------EKWRRRQGQRRQ-DVTGVREGE-HGRRAVPAQGGPEDVRE
                   *                .  *:                                   

AT1G04250.1     VKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMG-----KHGGEEGMIDFMNE--
Sb033829_Sorbi1 VKVSMDGAPYLRKVDLKMYKNYKDLSLALEKMFSCFTVGHSESNGKSGREG----LSD--
Sb020260_Sorbi1 VKVSMDGAPYLRKVDLKMYNSYKDLSIALKKMFSTFTTS-----GNN--------MNE--
Sb031861_Sorbi1 LPGGDDRAPPF----------ADHLSPAA---------------GQA--------QTE--
Sb020598_Sorbi1 LPGAVQGAPE----DVQLLH-HRQLRAA----------GDDER-GDEAAGG----PSERL
                :  . : **              .*  *                 .          .:  

AT1G04250.1     RKLMDLVNSW------------------------------DYVPSYEDKD----------
Sb033829_Sorbi1 CRLMDHKNGT------------------------------ELVLTYKDKD----------
Sb020260_Sorbi1 GKLVDPVSGA------------------------------DVVTTYEDKD----------
Sb031861_Sorbi1 LRLLEPQVRR-RHCCCRRHWPSSSPLGSRLLLLPCFCFVCFALLASQDEE----------
Sb020598_Sorbi1 RRLLAHVRGQGRRLDARRR----RPLGD----------VRGVVQAPPDHERIGSRRPRTQ
                 :*:                                      : :  *.:          

AT1G04250.1     GDWMLVGDVPWPMFVDT--C------KRLRLMKGSDAIGLAPRAMEKCKSRA
Sb033829_Sorbi1 GDWMLVGDVPWRMFTGS--C------RRLRIMKGSDAVGLAPRVSDKSKNG-
Sb020260_Sorbi1 GDWMLVGDVPWEMFVES--C------KRLRIMKSSEAIGLAPRTKDKCKNKS
Sb031861_Sorbi1 AGWLC-------------KCKGGGFANARGLGRGATTT--------------
Sb020598_Sorbi1 GD----GQVQQQLLSKAYYCGNASVSSRYQLTATVDNVLLLLLLHSVS----
                ..                 *          :
BoxShade v3.31 C (beta, 970507) Output
AT1G04250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb033829_Sorbi1    - - - M A P P Q E Q D Y - - - - - - - - I G - - - - - - - - - - - - - - - - - - L S P A - - - - - - - - - - - - - - - -
Sb020260_Sorbi1    - - R G G A Q G E R D N - - - - - - - - D G R - - - - - - - - - D R L A S N Q L L A P A E P - - - - - - - - - - - - - -
Sb031861_Sorbi1    L D E H L P R H V A D E H P V A V L V L V G R H V L G A V E Q I H Q L A L V H A V H P L R P T A S N G E G A E H L L E R
Sb020598_Sorbi1    - - - G G P R V R G D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R A P A R P A - - - - - - - - - - - - -
 
AT1G04250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M M G S - V E L N L - - - - - - - - - -
Sb033829_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A A A A - - - - - - - - - - - - - - - -
Sb020260_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K P M A G A D V D V G - - - - - - - - - - -
Sb031861_Sorbi1    L G Q L L V A L V H L E V H L A Q V R R A V Q A H L H E R R T T A S C R R R R G L V G V F A A A G A L V G L H G H D V L
Sb020598_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - R R - - - - - Q R R R G C R G G - E E A G F - - - - - - - - - -
 
AT1G04250.1     - - R - - - - - E T E L C L G L P - - - - - - G G D T V A - - - - - - - - - P V T G N - - - - - - - - K R G F S E T V D
Sb033829_Sorbi1    - - - - - - - - - T E L R L G L P G T E E A D G G E A A A G T P L T L E L L P K G G A - - - - - - - - K R G F T D A I -
Sb020260_Sorbi1    - - - - - - - - - T E L R L G L P - - - - - - G G G A E A - - - - - - - - - - A K A A - - - - - - - - K R G F E D T I D
Sb031861_Sorbi1    P E R P D R W P S H H L S L G G A - - - R L L G G V S L H - - - - - - - - - - G G G G - - - - - - - - - - - - - - - - -
Sb020598_Sorbi1    - - R G D - - H R P Q A E A G A A - - - - - - G G A A L G - - - - - - - - - E G G G G W R W R R R R P R R G P T V V A S
 
AT1G04250.1     L K L N L N N E P A N K E G S T T H D V V T F D S K E K S A C P - K D P A - - - - - - K P - - - - - - - - - - P A - K A
Sb033829_Sorbi1    - - - - - - - - - - - - - - - - - - - - V R R E A A A R G K A P A E D E E V D K K K T Q A - - - - - - - - - - P A A K A
Sb020260_Sorbi1    L K L K L P T A G M E E A A A A K P E P A A E K A K R P A E A P A A D A E - - - - - - K P - - - - - - - - - - P A P K A
Sb031861_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - D D A A L A R G P - - - - - - - - - L H L P - A D G G L L R G G H A A G V
Sb020598_Sorbi1    S S Q H R R R R Y G H E E V A - - - E P E Q R G H R R R A A G P - - - - - - - R K A S R P Q G T G G G L A A R P V V P Q
 
AT1G04250.1     Q V V G W P P V - - - - - - - - - - - - R S Y R K N V M - V S - - C Q K S S G G P E - - - - - - - - - - - - - - A A A F
Sb033829_Sorbi1    Q V V G W P P I - - - - - - - - - - - - R S Y R K N T M A M N Q P T L K T K D D G E - - - - - - - A K Q A L V Q D C L Y
Sb020260_Sorbi1    Q A V G W P P V - - - - - - - - - - - - R S Y R R N V M T V Q - - S V K S K K E E E P E K Q Q S A A A N A S G N S S A F
Sb031861_Sorbi1    F L G G G N T V L M L V R L R R L Q Y G R G S R R L Q L Q L - - - E V D G L C E A P - - - - - - - - - - - - - - - - - -
Sb020598_Sorbi1    E H P G R P I P - - - - - - - - - - - - E K W R R R Q G Q R R Q - D V T G V R E G E - H G R R A V P A Q G G P E D V R E
 
AT1G04250.1     V K V S M D G A P Y L R K I D L R M Y K S Y D E L S N A L S N M F S S F T M G - - - - - K H G G E E G M I D F M N E - -
Sb033829_Sorbi1    V K V S M D G A P Y L R K V D L K M Y K N Y K D L S L A L E K M F S C F T V G H S E S N G K S G R E G - - - - L S D - -
Sb020260_Sorbi1    V K V S M D G A P Y L R K V D L K M Y N S Y K D L S I A L K K M F S T F T T S - - - - - G N N - - - - - - - - M N E - -
Sb031861_Sorbi1    L P G G D D R A P P F - - - - - - - - - - A D H L S P A A - - - - - - - - - - - - - - - G Q A - - - - - - - - Q T E - -
Sb020598_Sorbi1    L P G A V Q G A P E - - - - D V Q L L H - H R Q L R A A - - - - - - - - - - G D D E R - G D E A A G G - - - - P S E R L
 
AT1G04250.1     R K L M D L V N S W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D Y V P S Y E D K D - - - - - - - - - -
Sb033829_Sorbi1    C R L M D H K N G T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E L V L T Y K D K D - - - - - - - - - -
Sb020260_Sorbi1    G K L V D P V S G A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D V V T T Y E D K D - - - - - - - - - -
Sb031861_Sorbi1    L R L L E P Q V R R - R H C C C R R H W P S S S P L G S R L L L L P C F C F V C F A L L A S Q D E E - - - - - - - - - -
Sb020598_Sorbi1    R R L L A H V R G Q G R R L D A R R R - - - - R P L G D - - - - - - - - - - V R G V V Q A P P D H E R I G S R R P R T Q
 
AT1G04250.1     G D W M L V G D V P W P M F V D T - - C - - - - - - K R L R L M K G S D A I G L A P R A M E K C K S R A
Sb033829_Sorbi1    G D W M L V G D V P W R M F T G S - - C - - - - - - R R L R I M K G S D A V G L A P R V S D K S K N G -
Sb020260_Sorbi1    G D W M L V G D V P W E M F V E S - - C - - - - - - K R L R I M K S S E A I G L A P R T K D K C K N K S
Sb031861_Sorbi1    A G W L C - - - - - - - - - - - - - K C K G G G F A N A R G L G R G A T T T - - - - - - - - - - - - - -
Sb020598_Sorbi1    G D - - - - G Q V Q Q Q L L S K A Y Y C G N A S V S S R Y Q L T A T V D N V L L L L L L H S V S - - - -
 
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