fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04370.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034947 not found in 138aa AT3G23220.1 1st_not 0.532994923 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04370.1     MDQGGRSSGSGGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAY
pt034947_POPTR_ MDEDKTKSKDEGG---EVKYRGVRKRPWGKFAAEIRDSARQGARVWLGTFSTAEEAARAY
                **:.  .* . **   : ******:*****:******* ::* *******.***:*****

AT1G04370.1     DRAAYSMRGKAAILNFPHEY-----NMGTGSSS-----------TAANSSSSSQQVFEFE
pt034947_POPTR_ DRAAYAMRGHLAVLNFPNEYPNMAGNASVGSSSSTPFSSSGYPGSSSSSSSTQQEVFEFE
                *****:***: *:****:**     * ..****           :::.***:.*:*****

AT1G04370.1     YLDDSVLDELLEYGENYNKTHNINMGKRQ
pt034947_POPTR_ CLDDKLLEELLEQEEKRSKKT--------
                 ***.:*:****  *: .*.
BoxShade v3.31 C (beta, 970507) Output
AT1G04370.1     M D Q G G R S S G S G G G G A E Q G K Y R G V R R R P W G K Y A A E I R D S R K H G E R V W L G T F D T A E D A A R A Y
pt034947_POPTR_    M D E D K T K S K D E G G - - - E V K Y R G V R K R P W G K F A A E I R D S A R Q G A R V W L G T F S T A E E A A R A Y
 
AT1G04370.1     D R A A Y S M R G K A A I L N F P H E Y - - - - - N M G T G S S S - - - - - - - - - - - T A A N S S S S S Q Q V F E F E
pt034947_POPTR_    D R A A Y A M R G H L A V L N F P N E Y P N M A G N A S V G S S S S T P F S S S G Y P G S S S S S S S T Q Q E V F E F E
 
AT1G04370.1     Y L D D S V L D E L L E Y G E N Y N K T H N I N M G K R Q
pt034947_POPTR_    C L D D K L L E E L L E Q E E K R S K K T - - - - - - - -
 
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