fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04370.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034953 not found in 131aa AT5G43410.1 1st_not 0.517766497 II
Os032604 not found in 136aa AT1G04370.1 not_1st 0.487309644 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04370.1     --MDQGGRSSGSGGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAAR
Os032604_Os08t0 MDGDGGGGWDDQGNGGGETTKYRGVRRRPSGKFAAEIRDSSRQSVRVWLGTFDTAEEAAR
Os034953_Os09t0 --MDHHHQQQQQ--EGELVAKYRGVRRRPWGKFAAEIRDSSRHGVRVWLGTFDTAEEAAR
                   *     . .   *    ********* **:******* ::. ***********:***

AT1G04370.1     AYDRAAYSMRGKAAILNFP----------HEYNMGTGSSSTAANSSSSSQ-QVFEFEYLD
Os032604_Os08t0 AYDRAAYAMRGHLAVLNFPAEARNYVR---------GSGSSSSSRQHQQR-QVIELECLD
Os034953_Os09t0 AYDRSAYSMRGANAVLNFPADAHIYARQLHNNNAAAGSSSSSSAAAAAARPPPIEFEYLD
                ****:**:***  *:****                 **.*:::      :   :*:* **

AT1G04370.1     DSVLDELLEYGENYNKTHNINMGKRQ--
Os032604_Os08t0 DQVLQEMLKGGDDQYRSAAGSK--RNNY
Os034953_Os09t0 DHVLQEML-------RDHTTNK------
                * **:*:*       :    .
BoxShade v3.31 C (beta, 970507) Output
AT1G04370.1     - - M D Q G G R S S G S G G G G A E Q G K Y R G V R R R P W G K Y A A E I R D S R K H G E R V W L G T F D T A E D A A R
Os032604_Os08t0    M D G D G G G G W D D Q G N G G G E T T K Y R G V R R R P S G K F A A E I R D S S R Q S V R V W L G T F D T A E E A A R
Os034953_Os09t0    - - M D H H H Q Q Q Q Q - - E G E L V A K Y R G V R R R P W G K F A A E I R D S S R H G V R V W L G T F D T A E E A A R
 
AT1G04370.1     A Y D R A A Y S M R G K A A I L N F P - - - - - - - - - - H E Y N M G T G S S S T A A N S S S S S Q - Q V F E F E Y L D
Os032604_Os08t0    A Y D R A A Y A M R G H L A V L N F P A E A R N Y V R - - - - - - - - - G S G S S S S S R Q H Q Q R - Q V I E L E C L D
Os034953_Os09t0    A Y D R S A Y S M R G A N A V L N F P A D A H I Y A R Q L H N N N A A A G S S S S S S A A A A A A R P P P I E F E Y L D
 
AT1G04370.1     D S V L D E L L E Y G E N Y N K T H N I N M G K R Q - -
Os032604_Os08t0    D Q V L Q E M L K G G D D Q Y R S A A G S K - - R N N Y
Os034953_Os09t0    D H V L Q E M L - - - - - - - R D H T T N K - - - - - -
 
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