fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04370.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb016028 not found in 124aa AT5G43410.1 1st_not 0.451776649 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04370.1     MDQGGRSSGSGGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAY
Sb016028_Sorbi1 MDDGG----------EPTKYRGVRRRPSGKFAAEIRDSSRQSVRVWLGTFDTAEEAARAY
                **:**          *  ********* **:******* ::. ***********:*****

AT1G04370.1     DRAAYSMRGKAAILNFPHE---YNMGTGSSSTA---------------ANSSSSSQQVFE
Sb016028_Sorbi1 DRAAYAMRGHLAVLNFPAEARNYVRGGGSSSSSRQQHQQQQQQGGGGGGGGSGGGRQVIE
                *****:***: *:**** *   *  * ****::               ...*...:**:*

AT1G04370.1     FEYLDDSVLDELLEYGENYNKTHNINMGKRQ
Sb016028_Sorbi1 LEYLDDQVLQEMLK-----------------
                :*****.**:*:*:
BoxShade v3.31 C (beta, 970507) Output
AT1G04370.1     M D Q G G R S S G S G G G G A E Q G K Y R G V R R R P W G K Y A A E I R D S R K H G E R V W L G T F D T A E D A A R A Y
Sb016028_Sorbi1    M D D G G - - - - - - - - - - E P T K Y R G V R R R P S G K F A A E I R D S S R Q S V R V W L G T F D T A E E A A R A Y
 
AT1G04370.1     D R A A Y S M R G K A A I L N F P H E - - - Y N M G T G S S S T A - - - - - - - - - - - - - - - A N S S S S S Q Q V F E
Sb016028_Sorbi1    D R A A Y A M R G H L A V L N F P A E A R N Y V R G G G S S S S S R Q Q H Q Q Q Q Q Q G G G G G G G G S G G G R Q V I E
 
AT1G04370.1     F E Y L D D S V L D E L L E Y G E N Y N K T H N I N M G K R Q
Sb016028_Sorbi1    L E Y L D D Q V L Q E M L K - - - - - - - - - - - - - - - - -
 
0