fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04370.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028119 not found in 147aa AT1G04370.1 not_1st 0.517766497 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04370.1     MDQGGRSSGSGGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAY
gm028119_Glyma1 MDEEG-SRGRAKEDAGDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAY
                **: * * * .  .* : :***********:******* ::*:*******:***:*****

AT1G04370.1     DRAAYSMRGKAAILNFPHEY--------NMGTGSSSTAANSSSSS---------------
gm028119_Glyma1 DRAAYTMRGPFAILNFPDEYPVTAAGATNAATYSSASSSSSLASSSRHADVEARGRSEQG
                *****:***  ******.**        * .* **::::.* :**               

AT1G04370.1     QQVFEFEYLDDSVLDELLEYGENYNKTHNINMGKRQ
gm028119_Glyma1 REVFEFEYLDDKLLEELLDC-ENKKKRGP-------
                ::*********.:*:***:  ** :*
BoxShade v3.31 C (beta, 970507) Output
AT1G04370.1     M D Q G G R S S G S G G G G A E Q G K Y R G V R R R P W G K Y A A E I R D S R K H G E R V W L G T F D T A E D A A R A Y
gm028119_Glyma1    M D E E G - S R G R A K E D A G D V R Y R G V R R R P W G K F A A E I R D S T R Q G Q R V W L G T F N T A E E A A R A Y
 
AT1G04370.1     D R A A Y S M R G K A A I L N F P H E Y - - - - - - - - N M G T G S S S T A A N S S S S S - - - - - - - - - - - - - - -
gm028119_Glyma1    D R A A Y T M R G P F A I L N F P D E Y P V T A A G A T N A A T Y S S A S S S S S L A S S S R H A D V E A R G R S E Q G
 
AT1G04370.1     Q Q V F E F E Y L D D S V L D E L L E Y G E N Y N K T H N I N M G K R Q
gm028119_Glyma1    R E V F E F E Y L D D K L L E E L L D C - E N K K K R G P - - - - - - -
 
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