fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04370.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055289 not found in 147aa AT1G04370.1 1st_1st 0.522842639 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04370.1     MDQGGRSSGSGGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAY
gm055289_Glyma2 MDEEG-SRGRAKEDAGDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAY
                **: * * * .  .* : :***********:******* ::*:*******:***:*****

AT1G04370.1     DRAAYSMRGKAAILNFPHEYNMGTGSS------STAANSSSSS-----------------
gm055289_Glyma2 DRAAYAMRGPFAILNFPDEYPMTAGGATNAATYSSAASSSSSASSSRHANVEARGRSEQG
                *****:***  ******.** * :*.:      *:**.****:                 

AT1G04370.1     QQVFEFEYLDDSVLDELLEYGENYNKTHNINMGKRQ
gm055289_Glyma2 REVFEFEYLDDRLLEELLDCEDKKKRGP--------
                ::********* :*:***:  :: ::
BoxShade v3.31 C (beta, 970507) Output
AT1G04370.1     M D Q G G R S S G S G G G G A E Q G K Y R G V R R R P W G K Y A A E I R D S R K H G E R V W L G T F D T A E D A A R A Y
gm055289_Glyma2    M D E E G - S R G R A K E D A G D V R Y R G V R R R P W G K F A A E I R D S T R Q G Q R V W L G T F N T A E E A A R A Y
 
AT1G04370.1     D R A A Y S M R G K A A I L N F P H E Y N M G T G S S - - - - - - S T A A N S S S S S - - - - - - - - - - - - - - - - -
gm055289_Glyma2    D R A A Y A M R G P F A I L N F P D E Y P M T A G G A T N A A T Y S S A A S S S S S A S S S R H A N V E A R G R S E Q G
 
AT1G04370.1     Q Q V F E F E Y L D D S V L D E L L E Y G E N Y N K T H N I N M G K R Q
gm055289_Glyma2    R E V F E F E Y L D D R L L E E L L D C E D K K K R G P - - - - - - - -
 
0