fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04550.2 LPAESELELGLGLSLG at 18/173 in AT1G04550.1
LPAESELELGLGLSLG at 18/239 in AT1G04550.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035802 CPEESELELGLGLSLS in 24/291 AT2G33310.3 1st_not 0.408988764 II
Pt041570 YPVEAELELGLSLGSG in 43/282 AT2G33310.3 1st_not 0.534831460 II
Pt034336 YPVEAELELGLGLSLG in 42/277 AT2G33310.3 not_not 0.528089887 III
Pt034335 YPVEAELELGLGLSLG in 42/303 AT2G33310.3 not_not 0.521348314 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04550.2     ------------------------MRGVS-----ELEVGKSNLPAESELELGLGL---SL
pt034335_POPTR_ MMEGCLGLL-GGGGSSGASTNKSTLSKVE-----VIEAEASSYPVEAELELGLGL---SL
pt041570_POPTR_ MMAGGLGSLGGGGGSSGASTNDSTMSKVE-----VVEAEASSYPVEAELELGLSLGSGGR
gm035802_Glyma1 ------------------------MSTVSKDDNLVLSSEDSSCPEESELELGLGL---SL
pt034336_POPTR_ MMEGCLGLL-GGGGSSGASTNKSTLSKVE-----VIEAEASSYPVEAELELGLGL---SL
                                        :  *.      :.   *. * *:******.*   . 

AT1G04550.2     GGG------------AWKERGRILTAKDFPSV-----------------------GSKRS
pt034335_POPTR_ GSGGGGKGK----ANAWGECGRILTAKDFPSVVSQPQRPNNNNSMPSTCVVGAVSGTKRA
pt041570_POPTR_ GGGGGGKGK----ANARGERGRILTAKDFPSV--------------------------RA
gm035802_Glyma1 SSGPSSKSHHHHVHAPTTLYARIYTAKDFPSSAAAASSSPSSSSSSSPNITA---GTKRA
pt034336_POPTR_ GSGGGGKGK----ANAWGECGRILTAKDFPSV--------------------------RA
                ..*            .    .** *******                           *:

AT1G04550.2     AESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEE--GDGEKKVVKNDELK
pt034335_POPTR_ ADSVSHEGGSPTAGSQVVGWPPIRAYRMNSLV-SQA-KAARAEEEKGIGEKDKSKENLKK
pt041570_POPTR_ ADSVSHEGGSPTAGSQVVGWPPIRAYRMNSLV-NQA-KAARAEEDKGIGEKDISKDNLKK
gm035802_Glyma1 AADSLVANNRP---SQVVGWPPLRTYRVNSFN-SHA-KSTEVFN--SVAEKSKINNTVVR
pt034336_POPTR_ ADSVSHEGGSPTAGSQVVGWPPIRAYRMNSLV-SQA-KAARAEEEKGIGEKDKSKENLKK
                * .    .  *   ********:  :*:**:  .:* *::.. :  . .**.  ::   :

AT1G04550.2     DV-------SMKVNPKVQGLG---FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFG
pt034335_POPTR_ KIC-NGNKTNATGNEKGH-LG---FVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFR
pt041570_POPTR_ KIC-NGNKTSAPSNEKGH-LG---FVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFFR
gm035802_Glyma1 KTNDNDNDNNINAKEKRH-LRSSLFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNE
pt034336_POPTR_ KIC-NGNKTNATGNEKGH-LG---FVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFR
                .        .   : * : *    ********: ******: **:.**.***:**:**  

AT1G04550.2     MTG-TTCR-------------EK---VKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRM
pt034335_POPTR_ STT-TINS----------IGGQK-PLSKFSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGM
pt041570_POPTR_ SAT-TINS----------IGGEKRQVTKPSKLLDGLSEFLLTYEDKEGDWMLVGDVPWGM
gm035802_Glyma1 STTVTTCKGSNGEDYGIIIGGER-----HSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGM
pt034336_POPTR_ STT-TINS----------IGGQK-PLSKFSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGM
                 :  *                ::       :**** *.*:****************** *

AT1G04550.2     FINSVKRLRIMGTSEASGLAPRRQEQKDRQRNNPV
pt034335_POPTR_ FLTSVKRLRIMRTSEANGLAPRLQDRNEKQRSKPV
pt041570_POPTR_ FLNSVKRLRIMRTSEANGLAPRFQDRNEKQRIKPV
gm035802_Glyma1 FLSSVRRLRIMRTSEANGLAPRLEE-NIKQRCKPI
pt034336_POPTR_ FLTSVKRLRIMRTSEANGLAPRLQDRNEKQRSKPV
                *:.**:***** ****.***** :: : :** :*:
BoxShade v3.31 C (beta, 970507) Output
AT1G04550.2     - - - - - - - - - - - - - - - - - - - - - - - - M R G V S - - - - - E L E V G K S N L P A E S E L E L G L G L - - - S L
pt034335_POPTR_    M M E G C L G L L - G G G G S S G A S T N K S T L S K V E - - - - - V I E A E A S S Y P V E A E L E L G L G L - - - S L
pt041570_POPTR_    M M A G G L G S L G G G G G S S G A S T N D S T M S K V E - - - - - V V E A E A S S Y P V E A E L E L G L S L G S G G R
gm035802_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - M S T V S K D D N L V L S S E D S S C P E E S E L E L G L G L - - - S L
pt034336_POPTR_    M M E G C L G L L - G G G G S S G A S T N K S T L S K V E - - - - - V I E A E A S S Y P V E A E L E L G L G L - - - S L
 
AT1G04550.2     G G G - - - - - - - - - - - - A W K E R G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - G S K R S
pt034335_POPTR_    G S G G G G K G K - - - - A N A W G E C G R I L T A K D F P S V V S Q P Q R P N N N N S M P S T C V V G A V S G T K R A
pt041570_POPTR_    G G G G G G K G K - - - - A N A R G E R G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - - R A
gm035802_Glyma1    S S G P S S K S H H H H V H A P T T L Y A R I Y T A K D F P S S A A A A S S S P S S S S S S S P N I T A - - - G T K R A
pt034336_POPTR_    G S G G G G K G K - - - - A N A W G E C G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - - R A
 
AT1G04550.2     A E S S S H Q G A S P P R S S Q V V G W P P I G L H R M N S L V N N Q A M K A A R A E E - - G D G E K K V V K N D E L K
pt034335_POPTR_    A D S V S H E G G S P T A G S Q V V G W P P I R A Y R M N S L V - S Q A - K A A R A E E E K G I G E K D K S K E N L K K
pt041570_POPTR_    A D S V S H E G G S P T A G S Q V V G W P P I R A Y R M N S L V - N Q A - K A A R A E E D K G I G E K D I S K D N L K K
gm035802_Glyma1    A A D S L V A N N R P - - - S Q V V G W P P L R T Y R V N S F N - S H A - K S T E V F N - - S V A E K S K I N N T V V R
pt034336_POPTR_    A D S V S H E G G S P T A G S Q V V G W P P I R A Y R M N S L V - S Q A - K A A R A E E E K G I G E K D K S K E N L K K
 
AT1G04550.2     D V - - - - - - - S M K V N P K V Q G L G - - - F V K V N M D G V G I G R K V D M R A H S S Y E N L A Q T L E E M F F G
pt034335_POPTR_    K I C - N G N K T N A T G N E K G H - L G - - - F V K V N M D G V P I G R K V D L N A H A C Y E T L A Q A L E E M F F R
pt041570_POPTR_    K I C - N G N K T S A P S N E K G H - L G - - - F V K V N M D G I P I G R K V D L N A H A C Y E T L A Q A L E E M F F R
gm035802_Glyma1    K T N D N D N D N N I N A K E K R H - L R S S L F V K V N M D G I P I G R K V D L S A H S S Y E T L A Q T L E D M F N E
pt034336_POPTR_    K I C - N G N K T N A T G N E K G H - L G - - - F V K V N M D G V P I G R K V D L N A H A C Y E T L A Q A L E E M F F R
 
AT1G04550.2     M T G - T T C R - - - - - - - - - - - - - E K - - - V K P L R L L D G S S D F V L T Y E D K E G D W M L V G D V P W R M
pt034335_POPTR_    S T T - T I N S - - - - - - - - - - I G G Q K - P L S K F S K L L D G S S E F V L T Y E D K E G D W M L V G D V P W G M
pt041570_POPTR_    S A T - T I N S - - - - - - - - - - I G G E K R Q V T K P S K L L D G L S E F L L T Y E D K E G D W M L V G D V P W G M
gm035802_Glyma1    S T T V T T C K G S N G E D Y G I I I G G E R - - - - - H S K L L D G S S K F V L T Y E D K E G D W M L V G D V P W G M
pt034336_POPTR_    S T T - T I N S - - - - - - - - - - I G G Q K - P L S K F S K L L D G S S E F V L T Y E D K E G D W M L V G D V P W G M
 
AT1G04550.2     F I N S V K R L R I M G T S E A S G L A P R R Q E Q K D R Q R N N P V
pt034335_POPTR_    F L T S V K R L R I M R T S E A N G L A P R L Q D R N E K Q R S K P V
pt041570_POPTR_    F L N S V K R L R I M R T S E A N G L A P R F Q D R N E K Q R I K P V
gm035802_Glyma1    F L S S V R R L R I M R T S E A N G L A P R L E E - N I K Q R C K P I
pt034336_POPTR_    F L T S V K R L R I M R T S E A N G L A P R L Q D R N E K Q R S K P V
 
0