fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04550.2 LPAESELELGLGLSLG at 18/173 in AT1G04550.1
LPAESELELGLGLSLG at 18/239 in AT1G04550.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041570 YPVEAELELGLSLGSG in 43/282 AT2G33310.3 1st_not 0.534831460 II
Pt034336 YPVEAELELGLGLSLG in 42/277 AT2G33310.3 not_not 0.528089887 III
Pt034335 YPVEAELELGLGLSLG in 42/303 AT2G33310.3 not_not 0.521348314 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04550.2     ------------------------MRGVSELEVGKSNLPAESELELGLGL---SLGGG--
pt034335_POPTR_ MMEGCLGLL-GGGGSSGASTNKSTLSKVEVIEAEASSYPVEAELELGLGL---SLGSGGG
pt041570_POPTR_ MMAGGLGSLGGGGGSSGASTNDSTMSKVEVVEAEASSYPVEAELELGLSLGSGGRGGGGG
pt034336_POPTR_ MMEGCLGLL-GGGGSSGASTNKSTLSKVEVIEAEASSYPVEAELELGLGL---SLGSGGG
                                        :  *. :*.  *. *.*:******.*   . *.*  

AT1G04550.2     ------AWKERGRILTAKDFPSV-----------------------GSKRSAESSSHQGA
pt034335_POPTR_ GKGKANAWGECGRILTAKDFPSVVSQPQRPNNNNSMPSTCVVGAVSGTKRAADSVSHEGG
pt041570_POPTR_ GKGKANARGERGRILTAKDFPSV--------------------------RAADSVSHEGG
pt034336_POPTR_ GKGKANAWGECGRILTAKDFPSV--------------------------RAADSVSHEGG
                      *  * ************                          *:*:* **:*.

AT1G04550.2     SPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEE--GDGEKKVVKNDELKDV------S
pt034335_POPTR_ SPTAGSQVVGWPPIRAYRMNSLVS-QA-KAARAEEEKGIGEKDKSKENLKKKICNGNKTN
pt041570_POPTR_ SPTAGSQVVGWPPIRAYRMNSLVN-QA-KAARAEEDKGIGEKDISKDNLKKKICNGNKTS
pt034336_POPTR_ SPTAGSQVVGWPPIRAYRMNSLVS-QA-KAARAEEEKGIGEKDKSKENLKKKICNGNKTN
                **. .*********  :******. ** *******  * ***.  *::  *.:      .

AT1G04550.2     MKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCR---EK-
pt034335_POPTR_ ATGNEKGH-LGFVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTINSIGGQK-
pt041570_POPTR_ APSNEKGH-LGFVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFFRSATTINSIGGEKR
pt034336_POPTR_ ATGNEKGH-LGFVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTINSIGGQK-
                   * * : **********: ******:.**:.**.***:******  : *      :* 

AT1G04550.2     --VKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQ
pt034335_POPTR_ PLSKFSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRLQ
pt041570_POPTR_ QVTKPSKLLDGLSEFLLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLAPRFQ
pt034336_POPTR_ PLSKFSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAPRLQ
                   *  :**** *:*:****************** **:.******** ****.***** *

AT1G04550.2     EQKDRQRNNPV
pt034335_POPTR_ DRNEKQRSKPV
pt041570_POPTR_ DRNEKQRIKPV
pt034336_POPTR_ DRNEKQRSKPV
                :::::** :**
BoxShade v3.31 C (beta, 970507) Output
AT1G04550.2     - - - - - - - - - - - - - - - - - - - - - - - - M R G V S E L E V G K S N L P A E S E L E L G L G L - - - S L G G G - -
pt034335_POPTR_    M M E G C L G L L - G G G G S S G A S T N K S T L S K V E V I E A E A S S Y P V E A E L E L G L G L - - - S L G S G G G
pt041570_POPTR_    M M A G G L G S L G G G G G S S G A S T N D S T M S K V E V V E A E A S S Y P V E A E L E L G L S L G S G G R G G G G G
pt034336_POPTR_    M M E G C L G L L - G G G G S S G A S T N K S T L S K V E V I E A E A S S Y P V E A E L E L G L G L - - - S L G S G G G
 
AT1G04550.2     - - - - - - A W K E R G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - G S K R S A E S S S H Q G A
pt034335_POPTR_    G K G K A N A W G E C G R I L T A K D F P S V V S Q P Q R P N N N N S M P S T C V V G A V S G T K R A A D S V S H E G G
pt041570_POPTR_    G K G K A N A R G E R G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - - R A A D S V S H E G G
pt034336_POPTR_    G K G K A N A W G E C G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - - R A A D S V S H E G G
 
AT1G04550.2     S P P R S S Q V V G W P P I G L H R M N S L V N N Q A M K A A R A E E - - G D G E K K V V K N D E L K D V - - - - - - S
pt034335_POPTR_    S P T A G S Q V V G W P P I R A Y R M N S L V S - Q A - K A A R A E E E K G I G E K D K S K E N L K K K I C N G N K T N
pt041570_POPTR_    S P T A G S Q V V G W P P I R A Y R M N S L V N - Q A - K A A R A E E D K G I G E K D I S K D N L K K K I C N G N K T S
pt034336_POPTR_    S P T A G S Q V V G W P P I R A Y R M N S L V S - Q A - K A A R A E E E K G I G E K D K S K E N L K K K I C N G N K T N
 
AT1G04550.2     M K V N P K V Q G L G F V K V N M D G V G I G R K V D M R A H S S Y E N L A Q T L E E M F F G M T G T T C R - - - E K -
pt034335_POPTR_    A T G N E K G H - L G F V K V N M D G V P I G R K V D L N A H A C Y E T L A Q A L E E M F F R S T T T I N S I G G Q K -
pt041570_POPTR_    A P S N E K G H - L G F V K V N M D G I P I G R K V D L N A H A C Y E T L A Q A L E E M F F R S A T T I N S I G G E K R
pt034336_POPTR_    A T G N E K G H - L G F V K V N M D G V P I G R K V D L N A H A C Y E T L A Q A L E E M F F R S T T T I N S I G G Q K -
 
AT1G04550.2     - - V K P L R L L D G S S D F V L T Y E D K E G D W M L V G D V P W R M F I N S V K R L R I M G T S E A S G L A P R R Q
pt034335_POPTR_    P L S K F S K L L D G S S E F V L T Y E D K E G D W M L V G D V P W G M F L T S V K R L R I M R T S E A N G L A P R L Q
pt041570_POPTR_    Q V T K P S K L L D G L S E F L L T Y E D K E G D W M L V G D V P W G M F L N S V K R L R I M R T S E A N G L A P R F Q
pt034336_POPTR_    P L S K F S K L L D G S S E F V L T Y E D K E G D W M L V G D V P W G M F L T S V K R L R I M R T S E A N G L A P R L Q
 
AT1G04550.2     E Q K D R Q R N N P V
pt034335_POPTR_    D R N E K Q R S K P V
pt041570_POPTR_    D R N E K Q R I K P V
pt034336_POPTR_    D R N E K Q R S K P V
 
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