fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04550.2 LPAESELELGLGLSLG at 18/173 in AT1G04550.1
LPAESELELGLGLSLG at 18/239 in AT1G04550.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035802 CPEESELELGLGLSLS in 24/291 AT2G33310.3 1st_not 0.408988764 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04550.2     MRGVSE-----LEVGKSNLPAESELELGLGLSLGGGAWKER------------GRILTAK
gm035802_Glyma1 MSTVSKDDNLVLSSEDSSCPEESELELGLGLSLSSGPSSKSHHHHVHAPTTLYARIYTAK
                *  **:     *.  .*. * ************..*. .:             .** ***

AT1G04550.2     DFPSVGSKRSAESSSHQGASP-----------------PRSSQVVGWPPIGLHRMNSLVN
gm035802_Glyma1 DFPSSAAAASSSPSSSSSSSPNITAGTKRAAADSLVANNRPSQVVGWPPLRTYRVNSF-N
                **** .:  *:..** ..:**                  *.********:  :*:**: *

AT1G04550.2     NQAMKA----ARAEEGDGEKKVVK----NDELKDVSMKVNPKVQGLGFVKVNMDGVGIGR
gm035802_Glyma1 SHAKSTEVFNSVAEKSKINNTVVRKTNDNDNDNNINAKEKRHLRSSLFVKVNMDGIPIGR
                .:* .:    : **:.. ::.**:    **: :::. * : :::.  ********: ***

AT1G04550.2     KVDMRAHSSYENLAQTLEEMFF-GMTGTTCREK-----------VKPLRLLDGSSDFVLT
gm035802_Glyma1 KVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGIIIGGERHSKLLDGSSKFVLT
                ***: ******.******:**  . * ***: .            :  :******.****

AT1G04550.2     YEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRNNPV
gm035802_Glyma1 YEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPRLEENI-KQRCKPI
                **************** **:.**:***** ****.***** :*:  :** :*:
BoxShade v3.31 C (beta, 970507) Output
AT1G04550.2     M R G V S E - - - - - L E V G K S N L P A E S E L E L G L G L S L G G G A W K E R - - - - - - - - - - - - G R I L T A K
gm035802_Glyma1    M S T V S K D D N L V L S S E D S S C P E E S E L E L G L G L S L S S G P S S K S H H H H V H A P T T L Y A R I Y T A K
 
AT1G04550.2     D F P S V G S K R S A E S S S H Q G A S P - - - - - - - - - - - - - - - - - P R S S Q V V G W P P I G L H R M N S L V N
gm035802_Glyma1    D F P S S A A A A S S S P S S S S S S S P N I T A G T K R A A A D S L V A N N R P S Q V V G W P P L R T Y R V N S F - N
 
AT1G04550.2     N Q A M K A - - - - A R A E E G D G E K K V V K - - - - N D E L K D V S M K V N P K V Q G L G F V K V N M D G V G I G R
gm035802_Glyma1    S H A K S T E V F N S V A E K S K I N N T V V R K T N D N D N D N N I N A K E K R H L R S S L F V K V N M D G I P I G R
 
AT1G04550.2     K V D M R A H S S Y E N L A Q T L E E M F F - G M T G T T C R E K - - - - - - - - - - - V K P L R L L D G S S D F V L T
gm035802_Glyma1    K V D L S A H S S Y E T L A Q T L E D M F N E S T T V T T C K G S N G E D Y G I I I G G E R H S K L L D G S S K F V L T
 
AT1G04550.2     Y E D K E G D W M L V G D V P W R M F I N S V K R L R I M G T S E A S G L A P R R Q E Q K D R Q R N N P V
gm035802_Glyma1    Y E D K E G D W M L V G D V P W G M F L S S V R R L R I M R T S E A N G L A P R L E E N I - K Q R C K P I
 
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