Input
| Putative repression domain
|
|
AT1G04550.2 |
LPAESELELGLGLSLG at 18/173 in AT1G04550.1 |
|
LPAESELELGLGLSLG at 18/239 in AT1G04550.2 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm035802 |
CPEESELELGLGLSLS in 24/291 |
AT2G33310.3 |
1st_not |
0.408988764 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G04550.2 MRGVSE-----LEVGKSNLPAESELELGLGLSLGGGAWKER------------GRILTAK
gm035802_Glyma1 MSTVSKDDNLVLSSEDSSCPEESELELGLGLSLSSGPSSKSHHHHVHAPTTLYARIYTAK
* **: *. .*. * ************..*. .: .** ***
AT1G04550.2 DFPSVGSKRSAESSSHQGASP-----------------PRSSQVVGWPPIGLHRMNSLVN
gm035802_Glyma1 DFPSSAAAASSSPSSSSSSSPNITAGTKRAAADSLVANNRPSQVVGWPPLRTYRVNSF-N
**** .: *:..** ..:** *.********: :*:**: *
AT1G04550.2 NQAMKA----ARAEEGDGEKKVVK----NDELKDVSMKVNPKVQGLGFVKVNMDGVGIGR
gm035802_Glyma1 SHAKSTEVFNSVAEKSKINNTVVRKTNDNDNDNNINAKEKRHLRSSLFVKVNMDGIPIGR
.:* .: : **:.. ::.**: **: :::. * : :::. ********: ***
AT1G04550.2 KVDMRAHSSYENLAQTLEEMFF-GMTGTTCREK-----------VKPLRLLDGSSDFVLT
gm035802_Glyma1 KVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGIIIGGERHSKLLDGSSKFVLT
***: ******.******:** . * ***: . : :******.****
AT1G04550.2 YEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQEQKDRQRNNPV
gm035802_Glyma1 YEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPRLEENI-KQRCKPI
**************** **:.**:***** ****.***** :*: :** :*:
BoxShade v3.31 C (beta, 970507) Output
AT1G04550.2 |
M |
R |
G |
V |
S |
E |
- |
- |
- |
- |
- |
L |
E |
V |
G |
K |
S |
N |
L |
P |
A |
E |
S |
E |
L |
E |
L |
G |
L |
G |
L |
S |
L |
G |
G |
G |
A |
W |
K |
E |
R |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
R |
I |
L |
T |
A |
K |
gm035802_Glyma1 |
M |
S |
T |
V |
S |
K |
D |
D |
N |
L |
V |
L |
S |
S |
E |
D |
S |
S |
C |
P |
E |
E |
S |
E |
L |
E |
L |
G |
L |
G |
L |
S |
L |
S |
S |
G |
P |
S |
S |
K |
S |
H |
H |
H |
H |
V |
H |
A |
P |
T |
T |
L |
Y |
A |
R |
I |
Y |
T |
A |
K |
|
AT1G04550.2 |
D |
F |
P |
S |
V |
G |
S |
K |
R |
S |
A |
E |
S |
S |
S |
H |
Q |
G |
A |
S |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
R |
S |
S |
Q |
V |
V |
G |
W |
P |
P |
I |
G |
L |
H |
R |
M |
N |
S |
L |
V |
N |
gm035802_Glyma1 |
D |
F |
P |
S |
S |
A |
A |
A |
A |
S |
S |
S |
P |
S |
S |
S |
S |
S |
S |
S |
P |
N |
I |
T |
A |
G |
T |
K |
R |
A |
A |
A |
D |
S |
L |
V |
A |
N |
N |
R |
P |
S |
Q |
V |
V |
G |
W |
P |
P |
L |
R |
T |
Y |
R |
V |
N |
S |
F |
- |
N |
|
AT1G04550.2 |
N |
Q |
A |
M |
K |
A |
- |
- |
- |
- |
A |
R |
A |
E |
E |
G |
D |
G |
E |
K |
K |
V |
V |
K |
- |
- |
- |
- |
N |
D |
E |
L |
K |
D |
V |
S |
M |
K |
V |
N |
P |
K |
V |
Q |
G |
L |
G |
F |
V |
K |
V |
N |
M |
D |
G |
V |
G |
I |
G |
R |
gm035802_Glyma1 |
S |
H |
A |
K |
S |
T |
E |
V |
F |
N |
S |
V |
A |
E |
K |
S |
K |
I |
N |
N |
T |
V |
V |
R |
K |
T |
N |
D |
N |
D |
N |
D |
N |
N |
I |
N |
A |
K |
E |
K |
R |
H |
L |
R |
S |
S |
L |
F |
V |
K |
V |
N |
M |
D |
G |
I |
P |
I |
G |
R |
|
AT1G04550.2 |
K |
V |
D |
M |
R |
A |
H |
S |
S |
Y |
E |
N |
L |
A |
Q |
T |
L |
E |
E |
M |
F |
F |
- |
G |
M |
T |
G |
T |
T |
C |
R |
E |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
V |
K |
P |
L |
R |
L |
L |
D |
G |
S |
S |
D |
F |
V |
L |
T |
gm035802_Glyma1 |
K |
V |
D |
L |
S |
A |
H |
S |
S |
Y |
E |
T |
L |
A |
Q |
T |
L |
E |
D |
M |
F |
N |
E |
S |
T |
T |
V |
T |
T |
C |
K |
G |
S |
N |
G |
E |
D |
Y |
G |
I |
I |
I |
G |
G |
E |
R |
H |
S |
K |
L |
L |
D |
G |
S |
S |
K |
F |
V |
L |
T |
|
AT1G04550.2 |
Y |
E |
D |
K |
E |
G |
D |
W |
M |
L |
V |
G |
D |
V |
P |
W |
R |
M |
F |
I |
N |
S |
V |
K |
R |
L |
R |
I |
M |
G |
T |
S |
E |
A |
S |
G |
L |
A |
P |
R |
R |
Q |
E |
Q |
K |
D |
R |
Q |
R |
N |
N |
P |
V |
gm035802_Glyma1 |
Y |
E |
D |
K |
E |
G |
D |
W |
M |
L |
V |
G |
D |
V |
P |
W |
G |
M |
F |
L |
S |
S |
V |
R |
R |
L |
R |
I |
M |
R |
T |
S |
E |
A |
N |
G |
L |
A |
P |
R |
L |
E |
E |
N |
I |
- |
K |
Q |
R |
C |
K |
P |
I |
|
|