fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04880.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003241 not found in 467aa AT1G04880.1 1st_1st 0.488578680 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04880.1     ----MASSSCLKQGSVPMNNVCV------TPEATYEAVVADPRLFMTSLERLHSLLGTKF
pt003241_POPTR_ MELAMASTSCAKQSPTLMKEPVMNYVQYPAPGATYEDVIVSPKLFMETLEKFHAAMGTKF
                    ***:** **... *::  :      :* **** *:..*:*** :**::*: :****

AT1G04880.1     MVPIIGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFS
pt003241_POPTR_ MIPIIGGKELNLHRLFVEVTSRGGIEKIIRERRWKEVTGVFNFPSTATNASFVLRKYYGS
                *:*****::*:**:***********:**:.********..* **.******:****** *

AT1G04880.1     LLNNYEQIYFFRSNGQIP--PDSMQSPSARPCFIQGAIRPSQELQALTFTPQ----PKIN
pt003241_POPTR_ LLQHYEQLYYFKARSWSPASPVPLQSSSISQCPAQVTVQPSPEYQAAAVKQQTANIPELC
                **::***:*:*::..  *  * .:**.*   *  * :::** * ** :.. *    *:: 

AT1G04880.1     TAEFLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHG
pt003241_POPTR_ RA--MPGSSASTSVIGVIDGKFESGYLVTVTVGSEKLKGVLYQ-APQNQ-SWQVPQ----
                 *  : ** *.:.*:****************:***:*******  ***  *:*.**    

AT1G04880.1     VLPNTL--NISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLK
pt003241_POPTR_ --PCSVPANNSVNTQAVPG--TRRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLK
                  * ::  * *.*.*.*.*  *:*************** *********************

AT1G04880.1     PLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISNA
pt003241_POPTR_ PLYPGKDREISRMIGELWNKINDSQKAVYQDKALKDKERYKIEMEGYRERLRTGKVISDA
                **:*****:***********:*:.:* :**.**::*****: ***.***: :.*::**:*

AT1G04880.1     VPLQQRLPEQNVDMAEADLPIDEVEEDDEEGDSSGSSGESEPHDDQSIETDPELEEPSLN
pt003241_POPTR_ VPLQQWLPGKDTEMVEVNVSTGETGGGSPQNDS--SSGESDS-EDKTAEKDLDMEASPLE
                ***** ** ::.:*.*.::. .*.  .. :.**  *****:. :*:: *.* ::* ..*:

AT1G04880.1     PSGPNLNPNPTEIVVAPKEKNGDVVMETS--------------------------PLKKA
pt003241_POPTR_ GLGAD---------------SGDMDVETSAEVTPFKLLSKREENVKDEGVEKPGNPATEN
                  *.:               .**: :***                          * .: 

AT1G04880.1     DEPTVAVTAEQN------
pt003241_POPTR_ SETTVQ-TLEENIHGGKH
                .*.**  * *:*
BoxShade v3.31 C (beta, 970507) Output
AT1G04880.1     - - - - M A S S S C L K Q G S V P M N N V C V - - - - - - T P E A T Y E A V V A D P R L F M T S L E R L H S L L G T K F
pt003241_POPTR_    M E L A M A S T S C A K Q S P T L M K E P V M N Y V Q Y P A P G A T Y E D V I V S P K L F M E T L E K F H A A M G T K F
 
AT1G04880.1     M V P I I G G R D L D L H K L F V E V T S R G G I N K I L N E R R W K E V T A T F V F P P T A T N A S Y V L R K Y Y F S
pt003241_POPTR_    M I P I I G G K E L N L H R L F V E V T S R G G I E K I I R E R R W K E V T G V F N F P S T A T N A S F V L R K Y Y G S
 
AT1G04880.1     L L N N Y E Q I Y F F R S N G Q I P - - P D S M Q S P S A R P C F I Q G A I R P S Q E L Q A L T F T P Q - - - - P K I N
pt003241_POPTR_    L L Q H Y E Q L Y Y F K A R S W S P A S P V P L Q S S S I S Q C P A Q V T V Q P S P E Y Q A A A V K Q Q T A N I P E L C
 
AT1G04880.1     T A E F L G G S L A G S N V V G V I D G K F E S G Y L V T V T I G S E Q L K G V L Y Q L L P Q N T V S Y Q T P Q Q S H G
pt003241_POPTR_    R A - - M P G S S A S T S V I G V I D G K F E S G Y L V T V T V G S E K L K G V L Y Q - A P Q N Q - S W Q V P Q - - - -
 
AT1G04880.1     V L P N T L - - N I S A N P Q G V A G G V T K R R R R R K K S E I K R R D P D H P K P N R S G Y N F F F A E Q H A R L K
pt003241_POPTR_    - - P C S V P A N N S V N T Q A V P G - - T R R R R R R K K S E I K R R D P A H P K P N R S G Y N F F F A E Q H A R L K
 
AT1G04880.1     P L H P G K D R D I S R M I G E L W N K L N E D E K L I Y Q G K A M E D K E R Y R T E M E D Y R E K K K N G Q L I S N A
pt003241_POPTR_    P L Y P G K D R E I S R M I G E L W N K I N D S Q K A V Y Q D K A L K D K E R Y K I E M E G Y R E R L R T G K V I S D A
 
AT1G04880.1     V P L Q Q R L P E Q N V D M A E A D L P I D E V E E D D E E G D S S G S S G E S E P H D D Q S I E T D P E L E E P S L N
pt003241_POPTR_    V P L Q Q W L P G K D T E M V E V N V S T G E T G G G S P Q N D S - - S S G E S D S - E D K T A E K D L D M E A S P L E
 
AT1G04880.1     P S G P N L N P N P T E I V V A P K E K N G D V V M E T S - - - - - - - - - - - - - - - - - - - - - - - - - - P L K K A
pt003241_POPTR_    G L G A D - - - - - - - - - - - - - - - S G D M D V E T S A E V T P F K L L S K R E E N V K D E G V E K P G N P A T E N
 
AT1G04880.1     D E P T V A V T A E Q N - - - - - -
pt003241_POPTR_    S E T T V Q - T L E E N I H G G K H
 
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