fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04880.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003241 not found in 467aa AT1G04880.1 1st_1st 0.488578680 Ia
Pt032063 not found in 334aa AT1G04880.1 not_1st 0.417512690 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04880.1     ----MASSSCLKQGSV----P-MNNVCV-TPEATYEAVVADPRLFMTSLERLHSLLGTKF
pt003241_POPTR_ MELAMASTSCAKQSPTLMKEPVMNYVQYPAPGATYEDVIVSPKLFMETLEKFHAAMGTKF
pt032063_POPTR_ ----------------------MSYVQYPAPGATYEDVIVSTKLFMETLEKFHAAMGTKF
                                      *. *   :* **** *:...:*** :**::*: :****

AT1G04880.1     MVPIIGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFS
pt003241_POPTR_ MIPIIGGKELNLHRLFVEVTSRGGIEKIIRERRWKEVTGVFNFPSTATNASFVLRKYYGS
pt032063_POPTR_ MIPIIAGKELNLHRLFVEVTSRGGIEKIIREKRWKEVTSVFNFPSTATNASFVLRKYYGS
                *:***.*::*:**:***********:**:.*:******..* **.******:****** *

AT1G04880.1     LLNNYEQIYFFRSNGQIP--PDSMQSPSARPCFIQGAIRPSQELQALTFTPQPKINTAE-
pt003241_POPTR_ LLQHYEQLYYFKARSWSPASPVPLQSSSISQCPAQVTVQPSPEYQAAA-VKQQTANIPEL
pt032063_POPTR_ LLQHYEQLYYFKARSWSPVSPVV-------------------------------------
                **::***:*:*::..  *  *                                       

AT1G04880.1     --FLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGV
pt003241_POPTR_ CRAMPGSSASTSVIGVIDGKFESGYLVTVTVGSEKLKGVLYQ-APQNQ-SWQVPQ-----
pt032063_POPTR_ --AMPGSSASPPVVGVIDGKFEGGYLVTVTVGSEKLKGVLYQ-APQNQ-SWPVPQ-----
                   : ** *.. *:********.*******:***:*******  ***  *: .**     

AT1G04880.1     LPNTL--NISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKP
pt003241_POPTR_ -PCSVPANNSVNTQAVPG--TRRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKP
pt032063_POPTR_ -P------------HVPG--TRRRRRRKKSEIKRRDPAHPKPNRSGYNFFFSEQHARLKP
                 *             *.*  *:*************** *************:********

AT1G04880.1     LHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISNAV
pt003241_POPTR_ LYPGKDREISRMIGELWNKINDSQKAVYQDKALKDKERYKIEMEGYRERLRTGKVISDAV
pt032063_POPTR_ LYPGKDREISRMIGELWNKINDSQKAVYQEKALRDKERYKIEMEGYRERLRTGKVIIDAV
                *:*****:***********:*:.:* :** **:.*****: ***.***: :.*::* :**

AT1G04880.1     PLQQRLPEQNVDMAEADLPIDEVEEDDEEGDSSGSSGESEPHDDQSIETDPELEEPSLNP
pt003241_POPTR_ PLQQWLPGKDTEMVEVNVSTGETGGGSPQNDSSSGESDSE---DKTAEKDLDMEASPLEG
pt032063_POPTR_ PLQQWIPGKDSEMVEASVRTEETGGGSLQNDGSSSESDSED-DDRTAEKDSDMEASPV--
                **** :* :: :*.*..:   *.  .. :.*.*....:**   *:: *.* ::* ..:  

AT1G04880.1     SGPNLNPNPTEIVVAPKEKNGDVVMETS--------------------------PLKKAD
pt003241_POPTR_ LGAD---------------SGDMDVETSAEVTPFKLLSKREENVKDEGVEKPGNPATENS
pt032063_POPTR_ ------------------------------------------------------------
                                                                            

AT1G04880.1     EPTVAVTAEQN------
pt003241_POPTR_ ETTVQ-TLEENIHGGKH
pt032063_POPTR_ -----------------
BoxShade v3.31 C (beta, 970507) Output
AT1G04880.1     - - - - M A S S S C L K Q G S V - - - - P - M N N V C V - T P E A T Y E A V V A D P R L F M T S L E R L H S L L G T K F
pt003241_POPTR_    M E L A M A S T S C A K Q S P T L M K E P V M N Y V Q Y P A P G A T Y E D V I V S P K L F M E T L E K F H A A M G T K F
pt032063_POPTR_    - - - - - - - - - - - - - - - - - - - - - - M S Y V Q Y P A P G A T Y E D V I V S T K L F M E T L E K F H A A M G T K F
 
AT1G04880.1     M V P I I G G R D L D L H K L F V E V T S R G G I N K I L N E R R W K E V T A T F V F P P T A T N A S Y V L R K Y Y F S
pt003241_POPTR_    M I P I I G G K E L N L H R L F V E V T S R G G I E K I I R E R R W K E V T G V F N F P S T A T N A S F V L R K Y Y G S
pt032063_POPTR_    M I P I I A G K E L N L H R L F V E V T S R G G I E K I I R E K R W K E V T S V F N F P S T A T N A S F V L R K Y Y G S
 
AT1G04880.1     L L N N Y E Q I Y F F R S N G Q I P - - P D S M Q S P S A R P C F I Q G A I R P S Q E L Q A L T F T P Q P K I N T A E -
pt003241_POPTR_    L L Q H Y E Q L Y Y F K A R S W S P A S P V P L Q S S S I S Q C P A Q V T V Q P S P E Y Q A A A - V K Q Q T A N I P E L
pt032063_POPTR_    L L Q H Y E Q L Y Y F K A R S W S P V S P V V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G04880.1     - - F L G G S L A G S N V V G V I D G K F E S G Y L V T V T I G S E Q L K G V L Y Q L L P Q N T V S Y Q T P Q Q S H G V
pt003241_POPTR_    C R A M P G S S A S T S V I G V I D G K F E S G Y L V T V T V G S E K L K G V L Y Q - A P Q N Q - S W Q V P Q - - - - -
pt032063_POPTR_    - - A M P G S S A S P P V V G V I D G K F E G G Y L V T V T V G S E K L K G V L Y Q - A P Q N Q - S W P V P Q - - - - -
 
AT1G04880.1     L P N T L - - N I S A N P Q G V A G G V T K R R R R R K K S E I K R R D P D H P K P N R S G Y N F F F A E Q H A R L K P
pt003241_POPTR_    - P C S V P A N N S V N T Q A V P G - - T R R R R R R K K S E I K R R D P A H P K P N R S G Y N F F F A E Q H A R L K P
pt032063_POPTR_    - P - - - - - - - - - - - - H V P G - - T R R R R R R K K S E I K R R D P A H P K P N R S G Y N F F F S E Q H A R L K P
 
AT1G04880.1     L H P G K D R D I S R M I G E L W N K L N E D E K L I Y Q G K A M E D K E R Y R T E M E D Y R E K K K N G Q L I S N A V
pt003241_POPTR_    L Y P G K D R E I S R M I G E L W N K I N D S Q K A V Y Q D K A L K D K E R Y K I E M E G Y R E R L R T G K V I S D A V
pt032063_POPTR_    L Y P G K D R E I S R M I G E L W N K I N D S Q K A V Y Q E K A L R D K E R Y K I E M E G Y R E R L R T G K V I I D A V
 
AT1G04880.1     P L Q Q R L P E Q N V D M A E A D L P I D E V E E D D E E G D S S G S S G E S E P H D D Q S I E T D P E L E E P S L N P
pt003241_POPTR_    P L Q Q W L P G K D T E M V E V N V S T G E T G G G S P Q N D S S S G E S D S E - - - D K T A E K D L D M E A S P L E G
pt032063_POPTR_    P L Q Q W I P G K D S E M V E A S V R T E E T G G G S L Q N D G S S S E S D S E D - D D R T A E K D S D M E A S P V - -
 
AT1G04880.1     S G P N L N P N P T E I V V A P K E K N G D V V M E T S - - - - - - - - - - - - - - - - - - - - - - - - - - P L K K A D
pt003241_POPTR_    L G A D - - - - - - - - - - - - - - - S G D M D V E T S A E V T P F K L L S K R E E N V K D E G V E K P G N P A T E N S
pt032063_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G04880.1     E P T V A V T A E Q N - - - - - -
pt003241_POPTR_    E T T V Q - T L E E N I H G G K H
pt032063_POPTR_    - - - - - - - - - - - - - - - - -
 
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