fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005220 not found in 415aa AT1G04990.1 1st_1st 0.426365795 Ia
Pt037877 not found in 450aa AT1G04990.1 1st_1st 0.434679334 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04990.1     MRTPMSD--TQHVQSSLVSIRSSDKIEDAFRKMKVNET----GVEELNPYPDRPGERDCQ
pt037877_POPTR_ ----MPDQNNRQVKSNAVSNHSADNIEEAFWRLKIHDPQEQGGMAQSSPYPDRPGVPDCG
gm005220_Glyma0 ----MPE--NRQVLRNA---DSGDNIEEAIRHLKINDNWDRDAAAQSTQYPDRPGEPECL
                    *.:  .::*  .     *.*:**:*: ::*:::     .  : . ******  :* 

AT1G04990.1     FYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYH
pt037877_POPTR_ YYLRTGLCGYGSNCRYNHPIYAAQG-TQLREELPERIGQPDCGYYIKTGTCKYGSTCKYH
gm005220_Glyma0 YYLRTGMCGYGTNCRYHHPAHISIG-THYGEELPQRAGQPDCEYFLKTGTCKYGSTCKYH
                :*****:****:.***:** : . . :   ****:* ***** *::***:****.*****

AT1G04990.1     HPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGH-------
pt037877_POPTR_ HPRDRNGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSLPLTG
gm005220_Glyma0 HPKDRRGAAPVSFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQHASLG-AYPLAG
                **:**.** ** **.:*****  **.****:** :*:***********  .         

AT1G04990.1     STAYGMS---SFPAADLRYASGLTMMSTYGTLPRP---------QVPQSYVPILVSPSQG
pt037877_POPTR_ AAAFGSTGSPIVPSSGLPYVGGL---PTWS-LPRAPPYMSGTHLQGPQAYMPVVVSPSQG
gm005220_Glyma0 SPTPTST---IIPTSGLPYAGGF---PAWSAVPRM-SYLSG---QGLQSYVPPFLSSSQG
                :.:   :    .*::.* *..*:   .::. :**          *  *:*:* .:*.***

AT1G04990.1     FLPPQGWAPYMA-----------ASNSMYNVKNQPYYSGSSASMAMAVALNR-GLSESSD
pt037877_POPTR_ IVPVPGWNTYVGNSNPMSSSSILGSNRAYDSRNH----GDSGSSGHLLSTAIPALPERPD
gm005220_Glyma0 VIPVQSWNNYMGNMNPAMPNGFLGSNLVYDYMNL----GESLFGGQAINS---ALPNRPD
                .:*  .*  *:.           .**  *:  *     *.*   .  :     .*.: .*

AT1G04990.1     QPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLIN---PFVLPARPGQPACGNFRSYG
pt037877_POPTR_ QPECRHFMSSGTCKYGSDCKYHHPKERIAQ---LATNTMGPFGLPLRPGQAVCPDYSMYG
gm005220_Glyma0 QPECRYFMSTGTCKYGSDCKFHHPKERMSQ---SLIN---PLGLPVRPGQAVCSYYRIYG
                *****.**.:******.***: **  *::*      *   *: ** ****..*  :  **

AT1G04990.1     FCKFGPNCKFDHPMLPYPGLTMATSLPTP----FASPVTTHQRISPTPNRSDSKSLSNGK
pt037877_POPTR_ ICKFGPTCRYDHPLPTYP---YNYSLSLPSLSMMDSSLVTYPRMA-------QAALSSAT
gm005220_Glyma0 MCKFGPTCKFDHPVLTIP---QNYGLTSPAMNVLDTPLTR--------------GLSNVQ
                :*****.*::***: . *      .*. *    : :.:.               .**.  

AT1G04990.1     PDVKKESSETEKPD-------------------NGEVQDLSEDASSP-------------
pt037877_POPTR_ P-----VSLSKLPDLIRNPDGASYNKHQNSDSNTKTLDDPTEHAGSPPPHSSQASSEPSH
gm005220_Glyma0 PP---ETSPSKLSD----------KKLQHSDAKAATEDSSKQDDTT--LNSFPASAEPLH
                *      * :: .*                       :. .:.  :              

AT1G04990.1     -
pt037877_POPTR_ D
gm005220_Glyma0 N
BoxShade v3.31 C (beta, 970507) Output
AT1G04990.1     M R T P M S D - - T Q H V Q S S L V S I R S S D K I E D A F R K M K V N E T - - - - G V E E L N P Y P D R P G E R D C Q
pt037877_POPTR_    - - - - M P D Q N N R Q V K S N A V S N H S A D N I E E A F W R L K I H D P Q E Q G G M A Q S S P Y P D R P G V P D C G
gm005220_Glyma0    - - - - M P E - - N R Q V L R N A - - - D S G D N I E E A I R H L K I N D N W D R D A A A Q S T Q Y P D R P G E P E C L
 
AT1G04990.1     F Y L R T G L C G Y G S S C R Y N H P T H L P Q D V A Y Y K E E L P E R I G Q P D C E Y F L K T G A C K Y G P T C K Y H
pt037877_POPTR_    Y Y L R T G L C G Y G S N C R Y N H P I Y A A Q G - T Q L R E E L P E R I G Q P D C G Y Y I K T G T C K Y G S T C K Y H
gm005220_Glyma0    Y Y L R T G M C G Y G T N C R Y H H P A H I S I G - T H Y G E E L P Q R A G Q P D C E Y F L K T G T C K Y G S T C K Y H
 
AT1G04990.1     H P K D R N G A Q P V M F N V I G L P M R L G E K P C P Y Y L R T G T C R F G V A C K F H H P Q P D N G H - - - - - - -
pt037877_POPTR_    H P R D R N G A G P V S F N A L G L P M R Q D E K S C P Y Y M R T R S C K F G V A C K F H H P Q P A S L G T S L P L T G
gm005220_Glyma0    H P K D R R G A A P V S F N T L G L P M R Q E E K S C P Y Y M R T G S C K F G V A C K F H H P Q H A S L G - A Y P L A G
 
AT1G04990.1     S T A Y G M S - - - S F P A A D L R Y A S G L T M M S T Y G T L P R P - - - - - - - - - Q V P Q S Y V P I L V S P S Q G
pt037877_POPTR_    A A A F G S T G S P I V P S S G L P Y V G G L - - - P T W S - L P R A P P Y M S G T H L Q G P Q A Y M P V V V S P S Q G
gm005220_Glyma0    S P T P T S T - - - I I P T S G L P Y A G G F - - - P A W S A V P R M - S Y L S G - - - Q G L Q S Y V P P F L S S S Q G
 
AT1G04990.1     F L P P Q G W A P Y M A - - - - - - - - - - - A S N S M Y N V K N Q P Y Y S G S S A S M A M A V A L N R - G L S E S S D
pt037877_POPTR_    I V P V P G W N T Y V G N S N P M S S S S I L G S N R A Y D S R N H - - - - G D S G S S G H L L S T A I P A L P E R P D
gm005220_Glyma0    V I P V Q S W N N Y M G N M N P A M P N G F L G S N L V Y D Y M N L - - - - G E S L F G G Q A I N S - - - A L P N R P D
 
AT1G04990.1     Q P E C R F F M N T G T C K Y G D D C K Y S H P G V R I S Q P P P S L I N - - - P F V L P A R P G Q P A C G N F R S Y G
pt037877_POPTR_    Q P E C R H F M S S G T C K Y G S D C K Y H H P K E R I A Q - - - L A T N T M G P F G L P L R P G Q A V C P D Y S M Y G
gm005220_Glyma0    Q P E C R Y F M S T G T C K Y G S D C K F H H P K E R M S Q - - - S L I N - - - P L G L P V R P G Q A V C S Y Y R I Y G
 
AT1G04990.1     F C K F G P N C K F D H P M L P Y P G L T M A T S L P T P - - - - F A S P V T T H Q R I S P T P N R S D S K S L S N G K
pt037877_POPTR_    I C K F G P T C R Y D H P L P T Y P - - - Y N Y S L S L P S L S M M D S S L V T Y P R M A - - - - - - - Q A A L S S A T
gm005220_Glyma0    M C K F G P T C K F D H P V L T I P - - - Q N Y G L T S P A M N V L D T P L T R - - - - - - - - - - - - - - G L S N V Q
 
AT1G04990.1     P D V K K E S S E T E K P D - - - - - - - - - - - - - - - - - - - N G E V Q D L S E D A S S P - - - - - - - - - - - - -
pt037877_POPTR_    P - - - - - V S L S K L P D L I R N P D G A S Y N K H Q N S D S N T K T L D D P T E H A G S P P P H S S Q A S S E P S H
gm005220_Glyma0    P P - - - E T S P S K L S D - - - - - - - - - - K K L Q H S D A K A A T E D S S K Q D D T T - - L N S F P A S A E P L H
 
AT1G04990.1     -
pt037877_POPTR_    D
gm005220_Glyma0    N
 
0