fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037877 not found in 450aa AT1G04990.1 1st_1st 0.434679334 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04990.1     MRTPMSDTQHVQSSLVSIRSSDKIEDAFRKMKVNET----GVEELNPYPDRPGERDCQFY
pt037877_POPTR_ --MPDQNNRQVKSNAVSNHSADNIEEAFWRLKIHDPQEQGGMAQSSPYPDRPGVPDCGYY
                   * .:.::*:*. ** :*:*:**:** ::*:::.    *: : .*******  ** :*

AT1G04990.1     LRTGLCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHP
pt037877_POPTR_ LRTGLCGYGSNCRYNHPIYAAQGTQ-LREELPERIGQPDCGYYIKTGTCKYGSTCKYHHP
                **********.****** : .*..   :************ *::***:****.*******

AT1G04990.1     KDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDN-GHS------T
pt037877_POPTR_ RDRNGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSLPLTGAA
                :***** ** **.:***** .**.****:** :*:************ . * *      :

AT1G04990.1     AYGMSS---FPAADLRYASGLTMMSTYGTLPRP---------QVPQSYVPILVSPSQGFL
pt037877_POPTR_ AFGSTGSPIVPSSGLPYVGGLPTWS----LPRAPPYMSGTHLQGPQAYMPVVVSPSQGIV
                *:* :.   .*::.* *..**.  *    ***.         * **:*:*::******::

AT1G04990.1     PPQGWAPYMAASNSM-----------YNVKNQPYYSGSSASMAMAVALNRGLSESSDQPE
pt037877_POPTR_ PVPGWNTYVGNSNPMSSSSILGSNRAYDSRNHG-DSGSSGHL-LSTAIP-ALPERPDQPE
                *  ** .*:. **.*           *: :*:   ****. : ::.*:  .*.* .****

AT1G04990.1     CRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGP
pt037877_POPTR_ CRHFMSSGTCKYGSDCKYHHPKERIAQLATNTMGPFGLPLRPGQAVCPDYSMYGICKFGP
                **.**.:******.**** **  **:* ... :.** ** ****..* ::  **:*****

AT1G04990.1     NCKFDHPMLPYPGLTMATSLP--TPFASPVTTHQRI------SPTPNRSDSKSLSNGKPD
pt037877_POPTR_ TCRYDHPLPTYP-YNYSLSLPSLSMMDSSLVTYPRMAQAALSSATP-----VSLSK-LPD
                .*::***: .**  . : ***  : : *.:.*: *:      *.**      ***:  **

AT1G04990.1     V----------KKESSETEKPDNGEVQDLSEDASSP--------------
pt037877_POPTR_ LIRNPDGASYNKHQNSDS---NTKTLDDPTEHAGSPPPHSSQASSEPSHD
                :          *::.*::   :.  ::* :*.*.**
BoxShade v3.31 C (beta, 970507) Output
AT1G04990.1     M R T P M S D T Q H V Q S S L V S I R S S D K I E D A F R K M K V N E T - - - - G V E E L N P Y P D R P G E R D C Q F Y
pt037877_POPTR_    - - M P D Q N N R Q V K S N A V S N H S A D N I E E A F W R L K I H D P Q E Q G G M A Q S S P Y P D R P G V P D C G Y Y
 
AT1G04990.1     L R T G L C G Y G S S C R Y N H P T H L P Q D V A Y Y K E E L P E R I G Q P D C E Y F L K T G A C K Y G P T C K Y H H P
pt037877_POPTR_    L R T G L C G Y G S N C R Y N H P I Y A A Q G T Q - L R E E L P E R I G Q P D C G Y Y I K T G T C K Y G S T C K Y H H P
 
AT1G04990.1     K D R N G A Q P V M F N V I G L P M R L G E K P C P Y Y L R T G T C R F G V A C K F H H P Q P D N - G H S - - - - - - T
pt037877_POPTR_    R D R N G A G P V S F N A L G L P M R Q D E K S C P Y Y M R T R S C K F G V A C K F H H P Q P A S L G T S L P L T G A A
 
AT1G04990.1     A Y G M S S - - - F P A A D L R Y A S G L T M M S T Y G T L P R P - - - - - - - - - Q V P Q S Y V P I L V S P S Q G F L
pt037877_POPTR_    A F G S T G S P I V P S S G L P Y V G G L P T W S - - - - L P R A P P Y M S G T H L Q G P Q A Y M P V V V S P S Q G I V
 
AT1G04990.1     P P Q G W A P Y M A A S N S M - - - - - - - - - - - Y N V K N Q P Y Y S G S S A S M A M A V A L N R G L S E S S D Q P E
pt037877_POPTR_    P V P G W N T Y V G N S N P M S S S S I L G S N R A Y D S R N H G - D S G S S G H L - L S T A I P - A L P E R P D Q P E
 
AT1G04990.1     C R F F M N T G T C K Y G D D C K Y S H P G V R I S Q P P P S L I N P F V L P A R P G Q P A C G N F R S Y G F C K F G P
pt037877_POPTR_    C R H F M S S G T C K Y G S D C K Y H H P K E R I A Q L A T N T M G P F G L P L R P G Q A V C P D Y S M Y G I C K F G P
 
AT1G04990.1     N C K F D H P M L P Y P G L T M A T S L P - - T P F A S P V T T H Q R I - - - - - - S P T P N R S D S K S L S N G K P D
pt037877_POPTR_    T C R Y D H P L P T Y P - Y N Y S L S L P S L S M M D S S L V T Y P R M A Q A A L S S A T P - - - - - V S L S K - L P D
 
AT1G04990.1     V - - - - - - - - - - K K E S S E T E K P D N G E V Q D L S E D A S S P - - - - - - - - - - - - - -
pt037877_POPTR_    L I R N P D G A S Y N K H Q N S D S - - - N T K T L D D P T E H A G S P P P H S S Q A S S E P S H D
 
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