fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037877 not found in 450aa AT1G04990.1 1st_1st 0.434679334 Ia
Pt016989 not found in 446aa AT1G04990.1 not_1st 0.413301662 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G04990.1     MRTPMSDTQHVQSSLVSIRSSDKIEDAFRKMKVN----ETGVEELNPYPDRPGERDCQFY
pt037877_POPTR_ --MPDQNNRQVKSNAVSNHSADNIEEAFWRLKIHDPQEQGGMAQSSPYPDRPGVPDCGYY
pt016989_POPTR_ --MPDHNNRQVKSNAVSNQSAENIEEAIWRLKIHDHQEQGGMAQSSPYPDRPGAPDCGYY
                   *  :.::*:*. ** :*:::**:*: ::*::    : *: : .*******  ** :*

AT1G04990.1     LRTGLCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHP
pt037877_POPTR_ LRTGLCGYGSNCRYNHPIYAAQG-TQLREELPERIGQPDCGYYIKTGTCKYGSTCKYHHP
pt016989_POPTR_ LRTGLCGYGSNCRFNHPVYAALG-AQLREELPERVGQPDCGYYLKTGTCKYGSTCKYHHP
                **********.**:*** : . . :  :******:***** *::***:****.*******

AT1G04990.1     KDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDN-GHS------T
pt037877_POPTR_ RDRNGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSLPLTGAA
pt016989_POPTR_ RDRNGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSFSLTGAA
                :***** ** **.:***** .**.****:** :*:************ . * *      :

AT1G04990.1     AYGMSS---FPAADLRYASGLTMMSTYGTLPRP---------QVPQSYVPILVSPSQGFL
pt037877_POPTR_ AFGSTGSPIVPSSGLPYVGGLPTWS----LPRAPPYMSGTHLQGPQAYMPVVVSPSQGIV
pt016989_POPTR_ AFGSTGSPIVPSSGLPYVGGLPTWS----LPRA-PLMSGTNLQGPQAYMPVVVSPSPGII
                *:* :.   .*::.* *..**.  *    ***.         * **:*:*::**** *::

AT1G04990.1     PPQGWAPYMAASNSM-----------YNVKNQPYYSGSSASMAMAVALNRGLSESSDQPE
pt037877_POPTR_ PVPGWNTYVGNSNPMSSSSILGSNRAYDSRNHG-DSGSSG--HLLSTAIPALPERPDQPE
pt016989_POPTR_ PVPGWNTYVGNLNPMSSSSILGSNRAYDSRNQG-DSGSGGQVHLLSTVSPILPERPGQPE
                *  ** .*:.  *.*           *: :*:   ***..   :  :    *.* ..***

AT1G04990.1     CRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGP
pt037877_POPTR_ CRHFMSSGTCKYGSDCKYHHPKERIAQLATNTMGPFGLPLRPGQAVCPDYSMYGICKFGP
pt016989_POPTR_ CRHFMSTGTCKYGSDCKYHHPKERIAQLATNTMGLLGLPSRPGQAVCPDYSMYGICKFGP
                **.**.:******.**** **  **:* ... :. : ** ****..* ::  **:*****

AT1G04990.1     NCKFDHPMLPYPGLTMATSLP--TPFASPVTTHQRISPTP-NRSDSKSLSNGKPDV--KK
pt037877_POPTR_ TCRYDHPLPTYP-YNYSLSLPSLSMMDSSLVTYPRMAQAALSSATPVSLSK-LPDLIRNP
pt016989_POPTR_ TCRYDHPIHTYP-YNYSLSLPSLSIMDSSLITYPRMAQAA-----PVTLSK-LPDLIHNP
                .*::***: .**  . : ***  : : *.: *: *:: :.     . :**:  **:  : 

AT1G04990.1     ESSETEKPDNGE-----VQDLSEDASSP--------------
pt037877_POPTR_ DGASYNKHQNSDSNTKTLDDPTEHAGSPPPHSSQASSEPSHD
pt016989_POPTR_ DGASYNKHQNPDTSTKISDDPTEQAGSPPPHSSQASSEPSHD
                :.:. :* :* :      :* :*.*.**
BoxShade v3.31 C (beta, 970507) Output
AT1G04990.1     M R T P M S D T Q H V Q S S L V S I R S S D K I E D A F R K M K V N - - - - E T G V E E L N P Y P D R P G E R D C Q F Y
pt037877_POPTR_    - - M P D Q N N R Q V K S N A V S N H S A D N I E E A F W R L K I H D P Q E Q G G M A Q S S P Y P D R P G V P D C G Y Y
pt016989_POPTR_    - - M P D H N N R Q V K S N A V S N Q S A E N I E E A I W R L K I H D H Q E Q G G M A Q S S P Y P D R P G A P D C G Y Y
 
AT1G04990.1     L R T G L C G Y G S S C R Y N H P T H L P Q D V A Y Y K E E L P E R I G Q P D C E Y F L K T G A C K Y G P T C K Y H H P
pt037877_POPTR_    L R T G L C G Y G S N C R Y N H P I Y A A Q G - T Q L R E E L P E R I G Q P D C G Y Y I K T G T C K Y G S T C K Y H H P
pt016989_POPTR_    L R T G L C G Y G S N C R F N H P V Y A A L G - A Q L R E E L P E R V G Q P D C G Y Y L K T G T C K Y G S T C K Y H H P
 
AT1G04990.1     K D R N G A Q P V M F N V I G L P M R L G E K P C P Y Y L R T G T C R F G V A C K F H H P Q P D N - G H S - - - - - - T
pt037877_POPTR_    R D R N G A G P V S F N A L G L P M R Q D E K S C P Y Y M R T R S C K F G V A C K F H H P Q P A S L G T S L P L T G A A
pt016989_POPTR_    R D R N G A G P V S F N A L G L P M R Q D E K S C P Y Y M R T R S C K F G V A C K F H H P Q P A S L G T S F S L T G A A
 
AT1G04990.1     A Y G M S S - - - F P A A D L R Y A S G L T M M S T Y G T L P R P - - - - - - - - - Q V P Q S Y V P I L V S P S Q G F L
pt037877_POPTR_    A F G S T G S P I V P S S G L P Y V G G L P T W S - - - - L P R A P P Y M S G T H L Q G P Q A Y M P V V V S P S Q G I V
pt016989_POPTR_    A F G S T G S P I V P S S G L P Y V G G L P T W S - - - - L P R A - P L M S G T N L Q G P Q A Y M P V V V S P S P G I I
 
AT1G04990.1     P P Q G W A P Y M A A S N S M - - - - - - - - - - - Y N V K N Q P Y Y S G S S A S M A M A V A L N R G L S E S S D Q P E
pt037877_POPTR_    P V P G W N T Y V G N S N P M S S S S I L G S N R A Y D S R N H G - D S G S S G - - H L L S T A I P A L P E R P D Q P E
pt016989_POPTR_    P V P G W N T Y V G N L N P M S S S S I L G S N R A Y D S R N Q G - D S G S G G Q V H L L S T V S P I L P E R P G Q P E
 
AT1G04990.1     C R F F M N T G T C K Y G D D C K Y S H P G V R I S Q P P P S L I N P F V L P A R P G Q P A C G N F R S Y G F C K F G P
pt037877_POPTR_    C R H F M S S G T C K Y G S D C K Y H H P K E R I A Q L A T N T M G P F G L P L R P G Q A V C P D Y S M Y G I C K F G P
pt016989_POPTR_    C R H F M S T G T C K Y G S D C K Y H H P K E R I A Q L A T N T M G L L G L P S R P G Q A V C P D Y S M Y G I C K F G P
 
AT1G04990.1     N C K F D H P M L P Y P G L T M A T S L P - - T P F A S P V T T H Q R I S P T P - N R S D S K S L S N G K P D V - - K K
pt037877_POPTR_    T C R Y D H P L P T Y P - Y N Y S L S L P S L S M M D S S L V T Y P R M A Q A A L S S A T P V S L S K - L P D L I R N P
pt016989_POPTR_    T C R Y D H P I H T Y P - Y N Y S L S L P S L S I M D S S L I T Y P R M A Q A A - - - - - P V T L S K - L P D L I H N P
 
AT1G04990.1     E S S E T E K P D N G E - - - - - V Q D L S E D A S S P - - - - - - - - - - - - - -
pt037877_POPTR_    D G A S Y N K H Q N S D S N T K T L D D P T E H A G S P P P H S S Q A S S E P S H D
pt016989_POPTR_    D G A S Y N K H Q N P D T S T K I S D D P T E Q A G S P P P H S S Q A S S E P S H D
 
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