fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G04990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005220 not found in 415aa AT1G04990.1 1st_1st 0.426365795 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G04990.1     MRTPMSDTQHVQSSLVSIRSSDKIEDAFRKMKVNET----GVEELNPYPDRPGERDCQFY
gm005220_Glyma0 ----MPENRQV---LRNADSGDNIEEAIRHLKINDNWDRDAAAQSTQYPDRPGEPECLYY
                    *.:.::*   * .  *.*:**:*:*::*:*:.    .. : . ******* :* :*

AT1G04990.1     LRTGLCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHP
gm005220_Glyma0 LRTGMCGYGTNCRYHHPAHISIG-THYGEELPQRAGQPDCEYFLKTGTCKYGSTCKYHHP
                ****:****:.***:**:*:. . ::* ****:* ************:****.*******

AT1G04990.1     KDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHST--AYGMS
gm005220_Glyma0 KDRRGAAPVSFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQ----HASLGAYPLA
                ***.** ** **.:*****  **.****:***:*:***********    *::  ** ::

AT1G04990.1     S--------FPAADLRYASGLTMMSTYGTLPR-----PQVPQSYVPILVSPSQGFLPPQG
gm005220_Glyma0 GSPTPTSTIIPTSGLPYAGGF---PAWSAVPRMSYLSGQGLQSYVPPFLSSSQGVIPVQS
                .        :*::.* **.*:   .::.::**      *  ***** ::*.***.:* *.

AT1G04990.1     WAPYMA-----------ASNSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFF
gm005220_Glyma0 WNNYMGNMNPAMPNGFLGSNLVYD------YMNLGESLFGGQAINSALPNRPDQPECRYF
                *  **.           .** :*:      * . . *:  . *:* .*.: .******:*

AT1G04990.1     MNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKF
gm005220_Glyma0 MSTGTCKYGSDCKFHHPKERMSQ---SLINPLGLPVRPGQAVCSYYRIYGMCKFGPTCKF
                *.*******.***: **  *:**   *****: **.****..*. :* **:*****.***

AT1G04990.1     DHPMLPYP---GLT--MATSLPTPFASPVTTHQRISPTPNRSDSKSLSNGKPDVKKESSE
gm005220_Glyma0 DHPVLTIPQNYGLTSPAMNVLDTPLTRGLSNVQPPETSPSKLSDKKLQHS--DAKAATED
                ***:*. *   ***    . * **::  ::. *  ..:*.: ..*.*.:.  *.*  :.:

AT1G04990.1     TEKPDNGEVQDLSEDASSP---
gm005220_Glyma0 SSKQDDTTLNSFPASA-EPLHN
                :.* *:  ::.:. .* .*
BoxShade v3.31 C (beta, 970507) Output
AT1G04990.1     M R T P M S D T Q H V Q S S L V S I R S S D K I E D A F R K M K V N E T - - - - G V E E L N P Y P D R P G E R D C Q F Y
gm005220_Glyma0    - - - - M P E N R Q V - - - L R N A D S G D N I E E A I R H L K I N D N W D R D A A A Q S T Q Y P D R P G E P E C L Y Y
 
AT1G04990.1     L R T G L C G Y G S S C R Y N H P T H L P Q D V A Y Y K E E L P E R I G Q P D C E Y F L K T G A C K Y G P T C K Y H H P
gm005220_Glyma0    L R T G M C G Y G T N C R Y H H P A H I S I G - T H Y G E E L P Q R A G Q P D C E Y F L K T G T C K Y G S T C K Y H H P
 
AT1G04990.1     K D R N G A Q P V M F N V I G L P M R L G E K P C P Y Y L R T G T C R F G V A C K F H H P Q P D N G H S T - - A Y G M S
gm005220_Glyma0    K D R R G A A P V S F N T L G L P M R Q E E K S C P Y Y M R T G S C K F G V A C K F H H P Q - - - - H A S L G A Y P L A
 
AT1G04990.1     S - - - - - - - - F P A A D L R Y A S G L T M M S T Y G T L P R - - - - - P Q V P Q S Y V P I L V S P S Q G F L P P Q G
gm005220_Glyma0    G S P T P T S T I I P T S G L P Y A G G F - - - P A W S A V P R M S Y L S G Q G L Q S Y V P P F L S S S Q G V I P V Q S
 
AT1G04990.1     W A P Y M A - - - - - - - - - - - A S N S M Y N V K N Q P Y Y S G S S A S M A M A V A L N R G L S E S S D Q P E C R F F
gm005220_Glyma0    W N N Y M G N M N P A M P N G F L G S N L V Y D - - - - - - Y M N L G E S L F G G Q A I N S A L P N R P D Q P E C R Y F
 
AT1G04990.1     M N T G T C K Y G D D C K Y S H P G V R I S Q P P P S L I N P F V L P A R P G Q P A C G N F R S Y G F C K F G P N C K F
gm005220_Glyma0    M S T G T C K Y G S D C K F H H P K E R M S Q - - - S L I N P L G L P V R P G Q A V C S Y Y R I Y G M C K F G P T C K F
 
AT1G04990.1     D H P M L P Y P - - - G L T - - M A T S L P T P F A S P V T T H Q R I S P T P N R S D S K S L S N G K P D V K K E S S E
gm005220_Glyma0    D H P V L T I P Q N Y G L T S P A M N V L D T P L T R G L S N V Q P P E T S P S K L S D K K L Q H S - - D A K A A T E D
 
AT1G04990.1     T E K P D N G E V Q D L S E D A S S P - - -
gm005220_Glyma0    S S K Q D D T T L N S F P A S A - E P L H N
 
0