Input
| Putative repression domain
|
|
AT1G05710.3 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt021450 |
not found in 268aa |
AT3G19500.1 |
not_not |
0.402027027 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G05710.3 ------------------------MEFSRD-----AGMMM----------ENKRNVC---
pt021450_POPTR_ MSGSESFLEGSHLVAEGNPPSLSELLFSNDDDELGAGVDMAHASRFSSTGKSPRMLCFGG
: **.* **: * :. * :*
AT1G05710.3 -----------------------------------------------SLGESSIKRHKSD
pt021450_POPTR_ YTHQNESETVMFSEATKTTPQISGVTCSDSSSASSGNNCNGTVNVISTVSKSNRKRNGSS
::.:*. **: *.
AT1G05710.3 LSFSSKE-------------------------------RKDKVGERISALQQIVSPYGKT
pt021450_POPTR_ QEVTAKSTNTIAKTNLPSQRTSKKTKTENPRSTGNAKVKREKVGDRITSLQQLVSPFGKT
..::*. :::***:**::***:***:***
AT1G05710.3 DTASVLLDAMHYIEFLHEQVKVLSAPYLQTVPDAT--QEELEQYSLRNRGLCLVPMENTV
pt021450_POPTR_ DTASVLHEAMGYIRFLQDQVKVLCSPYLQNLPVSTKVQSFFPIKNLSSRGLCLVPVDCTV
****** :** **.**::*****.:****.:* :* *. : .* .*******:: **
AT1G05710.3 GVAQSNGADIWAPVKTPLS-PAFSVTSQSPFR
pt021450_POPTR_ HLASSNGADFWSPATTEKNHPSFSSSKQ----
:*.*****:*:*..* . *:** :.*
BoxShade v3.31 C (beta, 970507) Output
AT1G05710.3 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
E |
F |
S |
R |
D |
- |
- |
- |
- |
- |
A |
G |
M |
M |
M |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
E |
N |
K |
R |
N |
V |
C |
- |
- |
- |
pt021450_POPTR_ |
M |
S |
G |
S |
E |
S |
F |
L |
E |
G |
S |
H |
L |
V |
A |
E |
G |
N |
P |
P |
S |
L |
S |
E |
L |
L |
F |
S |
N |
D |
D |
D |
E |
L |
G |
A |
G |
V |
D |
M |
A |
H |
A |
S |
R |
F |
S |
S |
T |
G |
K |
S |
P |
R |
M |
L |
C |
F |
G |
G |
|
AT1G05710.3 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
L |
G |
E |
S |
S |
I |
K |
R |
H |
K |
S |
D |
pt021450_POPTR_ |
Y |
T |
H |
Q |
N |
E |
S |
E |
T |
V |
M |
F |
S |
E |
A |
T |
K |
T |
T |
P |
Q |
I |
S |
G |
V |
T |
C |
S |
D |
S |
S |
S |
A |
S |
S |
G |
N |
N |
C |
N |
G |
T |
V |
N |
V |
I |
S |
T |
V |
S |
K |
S |
N |
R |
K |
R |
N |
G |
S |
S |
|
AT1G05710.3 |
L |
S |
F |
S |
S |
K |
E |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
K |
D |
K |
V |
G |
E |
R |
I |
S |
A |
L |
Q |
Q |
I |
V |
S |
P |
Y |
G |
K |
T |
pt021450_POPTR_ |
Q |
E |
V |
T |
A |
K |
S |
T |
N |
T |
I |
A |
K |
T |
N |
L |
P |
S |
Q |
R |
T |
S |
K |
K |
T |
K |
T |
E |
N |
P |
R |
S |
T |
G |
N |
A |
K |
V |
K |
R |
E |
K |
V |
G |
D |
R |
I |
T |
S |
L |
Q |
Q |
L |
V |
S |
P |
F |
G |
K |
T |
|
AT1G05710.3 |
D |
T |
A |
S |
V |
L |
L |
D |
A |
M |
H |
Y |
I |
E |
F |
L |
H |
E |
Q |
V |
K |
V |
L |
S |
A |
P |
Y |
L |
Q |
T |
V |
P |
D |
A |
T |
- |
- |
Q |
E |
E |
L |
E |
Q |
Y |
S |
L |
R |
N |
R |
G |
L |
C |
L |
V |
P |
M |
E |
N |
T |
V |
pt021450_POPTR_ |
D |
T |
A |
S |
V |
L |
H |
E |
A |
M |
G |
Y |
I |
R |
F |
L |
Q |
D |
Q |
V |
K |
V |
L |
C |
S |
P |
Y |
L |
Q |
N |
L |
P |
V |
S |
T |
K |
V |
Q |
S |
F |
F |
P |
I |
K |
N |
L |
S |
S |
R |
G |
L |
C |
L |
V |
P |
V |
D |
C |
T |
V |
|
AT1G05710.3 |
G |
V |
A |
Q |
S |
N |
G |
A |
D |
I |
W |
A |
P |
V |
K |
T |
P |
L |
S |
- |
P |
A |
F |
S |
V |
T |
S |
Q |
S |
P |
F |
R |
pt021450_POPTR_ |
H |
L |
A |
S |
S |
N |
G |
A |
D |
F |
W |
S |
P |
A |
T |
T |
E |
K |
N |
H |
P |
S |
F |
S |
S |
S |
K |
Q |
- |
- |
- |
- |
|
|