fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G05710.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021450 not found in 268aa AT3G19500.1 not_not 0.402027027 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G05710.3     ------------------------MEFSRD-----AGMMM----------ENKRNVC---
pt021450_POPTR_ MSGSESFLEGSHLVAEGNPPSLSELLFSNDDDELGAGVDMAHASRFSSTGKSPRMLCFGG
                                        : **.*     **: *          :. * :*   

AT1G05710.3     -----------------------------------------------SLGESSIKRHKSD
pt021450_POPTR_ YTHQNESETVMFSEATKTTPQISGVTCSDSSSASSGNNCNGTVNVISTVSKSNRKRNGSS
                                                               ::.:*. **: *.

AT1G05710.3     LSFSSKE-------------------------------RKDKVGERISALQQIVSPYGKT
pt021450_POPTR_ QEVTAKSTNTIAKTNLPSQRTSKKTKTENPRSTGNAKVKREKVGDRITSLQQLVSPFGKT
                 ..::*.                               :::***:**::***:***:***

AT1G05710.3     DTASVLLDAMHYIEFLHEQVKVLSAPYLQTVPDAT--QEELEQYSLRNRGLCLVPMENTV
pt021450_POPTR_ DTASVLHEAMGYIRFLQDQVKVLCSPYLQNLPVSTKVQSFFPIKNLSSRGLCLVPVDCTV
                ****** :** **.**::*****.:****.:* :*  *. :   .* .*******:: **

AT1G05710.3     GVAQSNGADIWAPVKTPLS-PAFSVTSQSPFR
pt021450_POPTR_ HLASSNGADFWSPATTEKNHPSFSSSKQ----
                 :*.*****:*:*..*  . *:** :.*
BoxShade v3.31 C (beta, 970507) Output
AT1G05710.3     - - - - - - - - - - - - - - - - - - - - - - - - M E F S R D - - - - - A G M M M - - - - - - - - - - E N K R N V C - - -
pt021450_POPTR_    M S G S E S F L E G S H L V A E G N P P S L S E L L F S N D D D E L G A G V D M A H A S R F S S T G K S P R M L C F G G
 
AT1G05710.3     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S L G E S S I K R H K S D
pt021450_POPTR_    Y T H Q N E S E T V M F S E A T K T T P Q I S G V T C S D S S S A S S G N N C N G T V N V I S T V S K S N R K R N G S S
 
AT1G05710.3     L S F S S K E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R K D K V G E R I S A L Q Q I V S P Y G K T
pt021450_POPTR_    Q E V T A K S T N T I A K T N L P S Q R T S K K T K T E N P R S T G N A K V K R E K V G D R I T S L Q Q L V S P F G K T
 
AT1G05710.3     D T A S V L L D A M H Y I E F L H E Q V K V L S A P Y L Q T V P D A T - - Q E E L E Q Y S L R N R G L C L V P M E N T V
pt021450_POPTR_    D T A S V L H E A M G Y I R F L Q D Q V K V L C S P Y L Q N L P V S T K V Q S F F P I K N L S S R G L C L V P V D C T V
 
AT1G05710.3     G V A Q S N G A D I W A P V K T P L S - P A F S V T S Q S P F R
pt021450_POPTR_    H L A S S N G A D F W S P A T T E K N H P S F S S S K Q - - - -
 
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