fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G05710.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015028 not found in 143aa AT1G05710.3 1st_1st 0.618243243 Ia
Pt015027 not found in 143aa AT1G05710.3 not_1st 0.618243243 II
Pt013129 not found in 143aa AT1G05710.3 not_1st 0.581081081 II
Pt021450 not found in 268aa AT3G19500.1 not_not 0.402027027 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G05710.3     ------------------------MEFSRD----------------------------AG
pt015027_POPTR_ ------------------------------------------------------------
pt021450_POPTR_ MSGSESFLEGSHLVAEGNPPSLSELLFSNDDDELGAGVDMAHASRFSSTGKSPRMLCFGG
pt013129_POPTR_ ------------------------------------------------------------
pt015028_POPTR_ ------------------------------------------------------------
                                                                            

AT1G05710.3     MMMENKRNVCSLGESSI-------------------------------------------
pt015027_POPTR_ -MMENKRSPCSVDHASLTS-----------------------------------------
pt021450_POPTR_ YTHQNESETVMFSEATKTTPQISGVTCSDSSSASSGNNCNGTVNVISTVSKSNRKRNGSS
pt013129_POPTR_ -MMENKRSPCSVDHGTLTS-----------------------------------------
pt015028_POPTR_ -MMENKRSPCSVDHASLTS-----------------------------------------
                   :*: .   ....:                                            

AT1G05710.3     ----------------------KRHKSDLSFSS---KERKDKVGERISALQQIVSPYGKT
pt015027_POPTR_ -------------------LATKRHKADFSIST---KERKEKLGERIVALQQLVSPYGKT
pt021450_POPTR_ QEVTAKSTNTIAKTNLPSQRTSKKTKTENPRSTGNAKVKREKVGDRITSLQQLVSPFGKT
pt013129_POPTR_ -------------------LATKRHKADFSIST---KERKEKLGERIVALQQLVSPYGKT
pt015028_POPTR_ -------------------LATKRHKADFSIST---KERKEKLGERIVALQQLVSPYGKT
                                      *: *:: . *:   * :::*:*:** :***:***:***

AT1G05710.3     DTASVLLDAMHYIEFLHEQVKVLSAPYLQTVPDAT--QEELEQYSLRNRGLCLVPMENTV
pt015027_POPTR_ DTASVLMEAMEYIRFLHEQVQVLSAPYLQGTSTAQ--MQELGQYSLRNKGLCLVPTSCTA
pt021450_POPTR_ DTASVLHEAMGYIRFLQDQVKVLCSPYLQNLPVSTKVQSFFPIKNLSSRGLCLVPVDCTV
pt013129_POPTR_ DTASVLMEAMEYIRFLHEQVQVLSAPYLQGTSTAQ--MQGLGQHSLESKGLCLVPISYTA
pt015028_POPTR_ DTASVLMEAMEYIRFLHEQVQVLSAPYLQGTSTAQ--MQELGQYSLRNKGLCLVPTSCTA
                ****** :** **.**::**:**.:****  . :    . :   .* .:****** . *.

AT1G05710.3     GVAQSNGADIWAPVKTPL-SPAFSVTSQSPFR
pt015027_POPTR_ GIARSNGADIWAPIKSP--SPKFN-KDVSPFH
pt021450_POPTR_ HLASSNGADFWSPATTEKNHPSFS-SSKQ---
pt013129_POPTR_ GIARSNGADIWAPIKSP--SPKCN-KSISQFH
pt015028_POPTR_ GIARSNGADIWAPIKSP--SPKFN-KDVSPFH
                 :* *****:*:* .:    *  . .. .
BoxShade v3.31 C (beta, 970507) Output
AT1G05710.3     - - - - - - - - - - - - - - - - - - - - - - - - M E F S R D - - - - - - - - - - - - - - - - - - - - - - - - - - - - A G
pt015027_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt021450_POPTR_    M S G S E S F L E G S H L V A E G N P P S L S E L L F S N D D D E L G A G V D M A H A S R F S S T G K S P R M L C F G G
pt013129_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt015028_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G05710.3     M M M E N K R N V C S L G E S S I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt015027_POPTR_    - M M E N K R S P C S V D H A S L T S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt021450_POPTR_    Y T H Q N E S E T V M F S E A T K T T P Q I S G V T C S D S S S A S S G N N C N G T V N V I S T V S K S N R K R N G S S
pt013129_POPTR_    - M M E N K R S P C S V D H G T L T S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt015028_POPTR_    - M M E N K R S P C S V D H A S L T S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G05710.3     - - - - - - - - - - - - - - - - - - - - - - K R H K S D L S F S S - - - K E R K D K V G E R I S A L Q Q I V S P Y G K T
pt015027_POPTR_    - - - - - - - - - - - - - - - - - - - L A T K R H K A D F S I S T - - - K E R K E K L G E R I V A L Q Q L V S P Y G K T
pt021450_POPTR_    Q E V T A K S T N T I A K T N L P S Q R T S K K T K T E N P R S T G N A K V K R E K V G D R I T S L Q Q L V S P F G K T
pt013129_POPTR_    - - - - - - - - - - - - - - - - - - - L A T K R H K A D F S I S T - - - K E R K E K L G E R I V A L Q Q L V S P Y G K T
pt015028_POPTR_    - - - - - - - - - - - - - - - - - - - L A T K R H K A D F S I S T - - - K E R K E K L G E R I V A L Q Q L V S P Y G K T
 
AT1G05710.3     D T A S V L L D A M H Y I E F L H E Q V K V L S A P Y L Q T V P D A T - - Q E E L E Q Y S L R N R G L C L V P M E N T V
pt015027_POPTR_    D T A S V L M E A M E Y I R F L H E Q V Q V L S A P Y L Q G T S T A Q - - M Q E L G Q Y S L R N K G L C L V P T S C T A
pt021450_POPTR_    D T A S V L H E A M G Y I R F L Q D Q V K V L C S P Y L Q N L P V S T K V Q S F F P I K N L S S R G L C L V P V D C T V
pt013129_POPTR_    D T A S V L M E A M E Y I R F L H E Q V Q V L S A P Y L Q G T S T A Q - - M Q G L G Q H S L E S K G L C L V P I S Y T A
pt015028_POPTR_    D T A S V L M E A M E Y I R F L H E Q V Q V L S A P Y L Q G T S T A Q - - M Q E L G Q Y S L R N K G L C L V P T S C T A
 
AT1G05710.3     G V A Q S N G A D I W A P V K T P L - S P A F S V T S Q S P F R
pt015027_POPTR_    G I A R S N G A D I W A P I K S P - - S P K F N - K D V S P F H
pt021450_POPTR_    H L A S S N G A D F W S P A T T E K N H P S F S - S S K Q - - -
pt013129_POPTR_    G I A R S N G A D I W A P I K S P - - S P K C N - K S I S Q F H
pt015028_POPTR_    G I A R S N G A D I W A P I K S P - - S P K F N - K D V S P F H
 
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