Input
| Putative repression domain
|
|
AT1G05710.3 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm019001 |
not found in 167aa |
AT1G05710.3 |
not_1st |
0.594594594 |
II |
Gm003958 |
not found in 165aa |
AT1G05710.3 |
not_1st |
0.570945945 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G05710.3 ----------MEFSRDAGM----MMENKRNVCSLGESSI-----KRHKSDLSFSSKERKD
gm003958_Glyma0 MIASSFCNADSMFSREEGIDVRKMMEHKRRPCSVDQSSYTSIASKRQKADLSISTKERKE
gm019001_Glyma0 MIASSFCNADSMFSREEGIDVRKMMEHKRSPCSVDQSSYTSIASKRQKADLSISTKERKE
***: *: ***:** **:.:** **:*:***:*:****:
AT1G05710.3 KVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQEELEQ
gm003958_Glyma0 KIGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQ--LLSAPYLESSPAAKMQGVEP
gm019001_Glyma0 KIGKRIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLESSPAAKMQGMEP
*:*:** ****:*********:*** :**.** ***:* :******:: * *. : :*
AT1G05710.3 YSLRNRGLCLVPMENTVGVAQSNGADIWAPVKTPLSPAFSVTSQSPFR
gm003958_Glyma0 CSLRSRGLCLVPVSVTIGVAESNGADIWAPIKTTTSPKFE-KDVSQFH
gm019001_Glyma0 CSLRSRGLCLVPVSFTIGVAETNGADIWAPIKTTTSPKFE-KDVSQFH
***.*******:. *:***::********:**. ** *. .. * *:
BoxShade v3.31 C (beta, 970507) Output
AT1G05710.3 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
E |
F |
S |
R |
D |
A |
G |
M |
- |
- |
- |
- |
M |
M |
E |
N |
K |
R |
N |
V |
C |
S |
L |
G |
E |
S |
S |
I |
- |
- |
- |
- |
- |
K |
R |
H |
K |
S |
D |
L |
S |
F |
S |
S |
K |
E |
R |
K |
D |
gm003958_Glyma0 |
M |
I |
A |
S |
S |
F |
C |
N |
A |
D |
S |
M |
F |
S |
R |
E |
E |
G |
I |
D |
V |
R |
K |
M |
M |
E |
H |
K |
R |
R |
P |
C |
S |
V |
D |
Q |
S |
S |
Y |
T |
S |
I |
A |
S |
K |
R |
Q |
K |
A |
D |
L |
S |
I |
S |
T |
K |
E |
R |
K |
E |
gm019001_Glyma0 |
M |
I |
A |
S |
S |
F |
C |
N |
A |
D |
S |
M |
F |
S |
R |
E |
E |
G |
I |
D |
V |
R |
K |
M |
M |
E |
H |
K |
R |
S |
P |
C |
S |
V |
D |
Q |
S |
S |
Y |
T |
S |
I |
A |
S |
K |
R |
Q |
K |
A |
D |
L |
S |
I |
S |
T |
K |
E |
R |
K |
E |
|
AT1G05710.3 |
K |
V |
G |
E |
R |
I |
S |
A |
L |
Q |
Q |
I |
V |
S |
P |
Y |
G |
K |
T |
D |
T |
A |
S |
V |
L |
L |
D |
A |
M |
H |
Y |
I |
E |
F |
L |
H |
E |
Q |
V |
K |
V |
L |
S |
A |
P |
Y |
L |
Q |
T |
V |
P |
D |
A |
T |
Q |
E |
E |
L |
E |
Q |
gm003958_Glyma0 |
K |
I |
G |
E |
R |
I |
V |
A |
L |
Q |
Q |
L |
V |
S |
P |
Y |
G |
K |
T |
D |
T |
S |
S |
V |
L |
K |
E |
A |
M |
E |
Y |
I |
G |
F |
L |
H |
K |
Q |
- |
- |
L |
L |
S |
A |
P |
Y |
L |
E |
S |
S |
P |
A |
A |
K |
M |
Q |
G |
V |
E |
P |
gm019001_Glyma0 |
K |
I |
G |
K |
R |
I |
V |
A |
L |
Q |
Q |
L |
V |
S |
P |
Y |
G |
K |
T |
D |
T |
S |
S |
V |
L |
K |
E |
A |
M |
E |
Y |
I |
G |
F |
L |
H |
K |
Q |
V |
K |
L |
L |
S |
A |
P |
Y |
L |
E |
S |
S |
P |
A |
A |
K |
M |
Q |
G |
M |
E |
P |
|
AT1G05710.3 |
Y |
S |
L |
R |
N |
R |
G |
L |
C |
L |
V |
P |
M |
E |
N |
T |
V |
G |
V |
A |
Q |
S |
N |
G |
A |
D |
I |
W |
A |
P |
V |
K |
T |
P |
L |
S |
P |
A |
F |
S |
V |
T |
S |
Q |
S |
P |
F |
R |
gm003958_Glyma0 |
C |
S |
L |
R |
S |
R |
G |
L |
C |
L |
V |
P |
V |
S |
V |
T |
I |
G |
V |
A |
E |
S |
N |
G |
A |
D |
I |
W |
A |
P |
I |
K |
T |
T |
T |
S |
P |
K |
F |
E |
- |
K |
D |
V |
S |
Q |
F |
H |
gm019001_Glyma0 |
C |
S |
L |
R |
S |
R |
G |
L |
C |
L |
V |
P |
V |
S |
F |
T |
I |
G |
V |
A |
E |
T |
N |
G |
A |
D |
I |
W |
A |
P |
I |
K |
T |
T |
T |
S |
P |
K |
F |
E |
- |
K |
D |
V |
S |
Q |
F |
H |
|
|