fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G05710.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003956 not found in 167aa AT1G05710.3 1st_1st 0.601351351 Ia
Gm019001 not found in 167aa AT1G05710.3 not_1st 0.594594594 II
Gm003958 not found in 165aa AT1G05710.3 not_1st 0.570945945 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G05710.3     ----------MEFSRDAGM----MMENKRNVCSLGESSI-----KRHKSDLSFSSKERKD
gm019001_Glyma0 MIASSFCNADSMFSREEGIDVRKMMEHKRSPCSVDQSSYTSIASKRQKADLSISTKERKE
gm003956_Glyma0 MIASSFCNADSMFSREEGIDVRKMMEHKRRPCSVDQSSYTSIASKRQKADLSISTKERKE
gm003958_Glyma0 MIASSFCNADSMFSREEGIDVRKMMEHKRRPCSVDQSSYTSIASKRQKADLSISTKERKE
                            ***: *:    ***:**  **:.:**      **:*:***:*:****:

AT1G05710.3     KVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQEELEQ
gm019001_Glyma0 KIGKRIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLESSPAAKMQGMEP
gm003956_Glyma0 KIGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLESSPAAKMQGVEP
gm003958_Glyma0 KIGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQ--LLSAPYLESSPAAKMQGVEP
                *:*:** ****:*********:*** :**.** ***:*  :******:: * *. : :* 

AT1G05710.3     YSLRNRGLCLVPMENTVGVAQSNGADIWAPVKTPLSPAFSVTSQSPFR
gm019001_Glyma0 CSLRSRGLCLVPVSFTIGVAETNGADIWAPIKTTTSPKFE-KDVSQFH
gm003956_Glyma0 CSLRSRGLCLVPVSVTIGVAESNGADIWAPIKTTTSPKFE-KDVSQFH
gm003958_Glyma0 CSLRSRGLCLVPVSVTIGVAESNGADIWAPIKTTTSPKFE-KDVSQFH
                 ***.*******:. *:***::********:**. ** *. .. * *:
BoxShade v3.31 C (beta, 970507) Output
AT1G05710.3     - - - - - - - - - - M E F S R D A G M - - - - M M E N K R N V C S L G E S S I - - - - - K R H K S D L S F S S K E R K D
gm019001_Glyma0    M I A S S F C N A D S M F S R E E G I D V R K M M E H K R S P C S V D Q S S Y T S I A S K R Q K A D L S I S T K E R K E
gm003956_Glyma0    M I A S S F C N A D S M F S R E E G I D V R K M M E H K R R P C S V D Q S S Y T S I A S K R Q K A D L S I S T K E R K E
gm003958_Glyma0    M I A S S F C N A D S M F S R E E G I D V R K M M E H K R R P C S V D Q S S Y T S I A S K R Q K A D L S I S T K E R K E
 
AT1G05710.3     K V G E R I S A L Q Q I V S P Y G K T D T A S V L L D A M H Y I E F L H E Q V K V L S A P Y L Q T V P D A T Q E E L E Q
gm019001_Glyma0    K I G K R I V A L Q Q L V S P Y G K T D T S S V L K E A M E Y I G F L H K Q V K L L S A P Y L E S S P A A K M Q G M E P
gm003956_Glyma0    K I G E R I V A L Q Q L V S P Y G K T D T S S V L K E A M E Y I G F L H K Q V K L L S A P Y L E S S P A A K M Q G V E P
gm003958_Glyma0    K I G E R I V A L Q Q L V S P Y G K T D T S S V L K E A M E Y I G F L H K Q - - L L S A P Y L E S S P A A K M Q G V E P
 
AT1G05710.3     Y S L R N R G L C L V P M E N T V G V A Q S N G A D I W A P V K T P L S P A F S V T S Q S P F R
gm019001_Glyma0    C S L R S R G L C L V P V S F T I G V A E T N G A D I W A P I K T T T S P K F E - K D V S Q F H
gm003956_Glyma0    C S L R S R G L C L V P V S V T I G V A E S N G A D I W A P I K T T T S P K F E - K D V S Q F H
gm003958_Glyma0    C S L R S R G L C L V P V S V T I G V A E S N G A D I W A P I K T T T S P K F E - K D V S Q F H
 
0