fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G05805.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018089 not found in 342aa AT1G05805.1 1st_1st 0.4144 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G05805.1     MYQSSSSTSSSSQRSSLPGGGGLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSD
pt018089_POPTR_ MYQQPSSSSSSPQKSNLP--SGLTRYGSAPGSFLTRAVDSVIGAD----RELSGL--GST
                ***..**:***.*:*.**  .** **********. .**.***..    *:::*   .* 

AT1G05805.1     NFIG--NFFTGAADSSSLRSDSTTCGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNE
pt018089_POPTR_ PLVGRQQHFSG--DSPSITSES-TCKVNSSSCDRKAPKSGGGGG------LQRSY-GLNE
                 ::*  :.*:*  **.*: *:* ** **.** .:*   ......      *:*** *:**

AT1G05805.1     ISQQHKSNDIGGGNSSGSYSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGG
pt018089_POPTR_ IAH-------------GAGSLVRQRSSPAGFLSHLATENGGFSITRGTGGYNSRNGSGGG
                *::             *: **.*******.*:::**:::..**:.: *..*..:.**.**

AT1G05805.1     RGHSRLKSQLSFTNHDSLARINEVNETPVH--------DGSGHSFSAASFGAATTDSWDD
pt018089_POPTR_ P--SRLKSQLSFTRQDSLSQISEVSENVVEGIGSDNGSQNSTHSYSAASFG---MESWDT
                   **********.:***::*.**.*. *.        :.* **:******    :*** 

AT1G05805.1     GSGSIGFTVTRPSKRSKDMDSGLFS-------QYSLPSDT-SMNYMDNFMQLPEDSVPCK
pt018089_POPTR_ -PNSIVFS-GHPSKQARTGDGDIYSCFNALETQFSLPQTSLEMATVEKLLQIPEDSVPCK
                 ..** *:  :***:::  *..::*       *:***. : .*  :::::*:********

AT1G05805.1     IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ
pt018089_POPTR_ IRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQNE
                ****************************.**************:***:***:******::

AT1G05805.1     LQNLKKDQENCTCGCSEKPS
pt018089_POPTR_ VEKLHKELEGCTCGCKQSTP
                :::*:*: *.*****.:...
BoxShade v3.31 C (beta, 970507) Output
AT1G05805.1     M Y Q S S S S T S S S S Q R S S L P G G G G L I R Y G S A P G S F L N S V V D E V I G G G S S N A R D F T G Y Q P S S D
pt018089_POPTR_    M Y Q Q P S S S S S S P Q K S N L P - - S G L T R Y G S A P G S F L T R A V D S V I G A D - - - - R E L S G L - - G S T
 
AT1G05805.1     N F I G - - N F F T G A A D S S S L R S D S T T C G V N N S S D G Q K Q L G N N N N N N S N K D I F L D R S Y G G F N E
pt018089_POPTR_    P L V G R Q Q H F S G - - D S P S I T S E S - T C K V N S S S C D R K A P K S G G G G G - - - - - - L Q R S Y - G L N E
 
AT1G05805.1     I S Q Q H K S N D I G G G N S S G S Y S L A R Q R S S P A D F F T Y L A S D K N N F S L N Q P T S D Y S P Q G G S N G G
pt018089_POPTR_    I A H - - - - - - - - - - - - - G A G S L V R Q R S S P A G F L S H L A T E N G G F S I T R G T G G Y N S R N G S G G G
 
AT1G05805.1     R G H S R L K S Q L S F T N H D S L A R I N E V N E T P V H - - - - - - - - D G S G H S F S A A S F G A A T T D S W D D
pt018089_POPTR_    P - - S R L K S Q L S F T R Q D S L S Q I S E V S E N V V E G I G S D N G S Q N S T H S Y S A A S F G - - - M E S W D T
 
AT1G05805.1     G S G S I G F T V T R P S K R S K D M D S G L F S - - - - - - - Q Y S L P S D T - S M N Y M D N F M Q L P E D S V P C K
pt018089_POPTR_    - P N S I V F S - G H P S K Q A R T G D G D I Y S C F N A L E T Q F S L P Q T S L E M A T V E K L L Q I P E D S V P C K
 
AT1G05805.1     I R A K R G C A T H P R S I A E R E R R T R I S G K L K K L Q D L V P N M D K Q T S Y S D M L D L A V Q H I K G L Q H Q
pt018089_POPTR_    I R A K R G C A T H P R S I A E R E R R T R I S G K L K T L Q D L V P N M D K Q T S Y A D M L E L A V K H I K G L Q N E
 
AT1G05805.1     L Q N L K K D Q E N C T C G C S E K P S
pt018089_POPTR_    V E K L H K E L E G C T C G C K Q S T P
 
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