fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G05805.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026287 not found in 551aa AT1G05805.1 1st_1st 0.296 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G05805.1     -----MYQSSSSTSS----SSQRSS-----------------------------------
Sb026287_Sorbi1 RARTTTARASASLAQSHAPSSQKSSGQARQGEQSTRAAATQHITIHERSPAYSRQQPAMN
                       ::*:* :.    ***:**                                   

AT1G05805.1     ----LPG-----------GGGLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSDN
Sb026287_Sorbi1 LNRLTPAHHGAMRPPSVQGQGLARYGSAPGSLLAAIAESVTRG------DPAPPPPPVSR
                     *.           * ** ********:* ::.:.*  *      * :   *. ..

AT1G05805.1     FIGNFFTGAADSSSLRSDSTTCGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNEI--
Sb026287_Sorbi1 FY------SAESSGLTSCESSCRTDGGGGGRPPP-------------LERAYGGSGEIRV
                *       :*:**.* * .::* .:....*:                *:*:*** .**  

AT1G05805.1     ----SQQHKSNDIGGGNSSGSYSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGS
Sb026287_Sorbi1 PPPPQQQH---------PLAASTLFRHSSSPAGLLSRLMADPHGMAATGGGMGSYPQVGS
                    .***         . .: :* *: ****.::: * :* :.:: .    .  ** **

AT1G05805.1     NG--GRGHSRLKSQLSFTNHDSLARINEVNETP-----VHDGSGHSFSAASFGAAT----
Sb026287_Sorbi1 DAAMGHGHRQLSSQWSFSRQD-LPQISEMGMIPDIGESIVAGGCNSSSEGGGGGATQAQS
                :.  *:** :*.** **:.:* *.:*.*:.  *     :  *. :* * .. *.**    

AT1G05805.1     ---------TDSWDDGSGSIGFTVTRPSKRSK-----DMD---SGLFSQYSLP-SDTSMN
Sb026287_Sorbi1 SSYLSRNFSVSSWDD-TNSIMF--SSPSKKPKVDPADDMVTSFSNIDSQFGLSNSSLEMS
                         ..**** :.** *  : ***:.*     **    *.: **:.*. *. .*.

AT1G05805.1     YMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYS
Sb026287_Sorbi1 GMDDYLQMQQDSVACRVRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTS
                 **:::*: :***.*::*********************** :***************. *

AT1G05805.1     DMLDLAVQHIKGLQHQLQNLKKDQENCTC------GCSEKPS
Sb026287_Sorbi1 DMLDLAVDYIKELKDRVEKLKHDQANCCCLGVANKGC-----
                *******::** *:.::::**:** ** *      **
BoxShade v3.31 C (beta, 970507) Output
AT1G05805.1     - - - - - M Y Q S S S S T S S - - - - S S Q R S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026287_Sorbi1    R A R T T T A R A S A S L A Q S H A P S S Q K S S G Q A R Q G E Q S T R A A A T Q H I T I H E R S P A Y S R Q Q P A M N
 
AT1G05805.1     - - - - L P G - - - - - - - - - - - G G G L I R Y G S A P G S F L N S V V D E V I G G G S S N A R D F T G Y Q P S S D N
Sb026287_Sorbi1    L N R L T P A H H G A M R P P S V Q G Q G L A R Y G S A P G S L L A A I A E S V T R G - - - - - - D P A P P P P P V S R
 
AT1G05805.1     F I G N F F T G A A D S S S L R S D S T T C G V N N S S D G Q K Q L G N N N N N N S N K D I F L D R S Y G G F N E I - -
Sb026287_Sorbi1    F Y - - - - - - S A E S S G L T S C E S S C R T D G G G G G R P P P - - - - - - - - - - - - - L E R A Y G G S G E I R V
 
AT1G05805.1     - - - - S Q Q H K S N D I G G G N S S G S Y S L A R Q R S S P A D F F T Y L A S D K N N F S L N Q P T S D Y S P Q G G S
Sb026287_Sorbi1    P P P P Q Q Q H - - - - - - - - - P L A A S T L F R H S S S P A G L L S R L M A D P H G M A A T G G G M G S Y P Q V G S
 
AT1G05805.1     N G - - G R G H S R L K S Q L S F T N H D S L A R I N E V N E T P - - - - - V H D G S G H S F S A A S F G A A T - - - -
Sb026287_Sorbi1    D A A M G H G H R Q L S S Q W S F S R Q D - L P Q I S E M G M I P D I G E S I V A G G C N S S S E G G G G G A T Q A Q S
 
AT1G05805.1     - - - - - - - - - T D S W D D G S G S I G F T V T R P S K R S K - - - - - D M D - - - S G L F S Q Y S L P - S D T S M N
Sb026287_Sorbi1    S S Y L S R N F S V S S W D D - T N S I M F - - S S P S K K P K V D P A D D M V T S F S N I D S Q F G L S N S S L E M S
 
AT1G05805.1     Y M D N F M Q L P E D S V P C K I R A K R G C A T H P R S I A E R E R R T R I S G K L K K L Q D L V P N M D K Q T S Y S
Sb026287_Sorbi1    G M D D Y L Q M Q Q D S V A C R V R A K R G C A T H P R S I A E R E R R T R I S K R L K K L Q D L V P N M D K Q T N T S
 
AT1G05805.1     D M L D L A V Q H I K G L Q H Q L Q N L K K D Q E N C T C - - - - - - G C S E K P S
Sb026287_Sorbi1    D M L D L A V D Y I K E L K D R V E K L K H D Q A N C C C L G V A N K G C - - - - -
 
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