fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G05805.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055764 not found in 286aa AT1G05805.1 1st_1st 0.3328 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G05805.1     MYQSSSSTSSSSQRSSLPGGGGLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSD
gm055764_Glyma2 MYPSSSSSSSSSSQSMTQ--AGLTRYGSAPGSLLTSTVDSLIGGS----------RPSP-
                ** ****:****.:*     .** ********:*.*.**.:***.          :**. 

AT1G05805.1     NFIGNFFTGAADSSSLRSDSTTCGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNEIS
gm055764_Glyma2 -----YFSGESSESPCKE-------------QRSFHNH----------------------
                     :*:* :..*. :.             *:.: *:                      

AT1G05805.1     QQHKSNDIGGGNSSGSYSLARQRSSPADFFTYLASDKN-NFSLNQPTSDYSPQG--GSNG
gm055764_Glyma2 -----------PPSFASSLLRQKSSPAGFLSHLSNHHGVGFTI-------TPGGLSNSNS
                            .* : ** **:****.*:::*:..:. .*::       :* *  .**.

AT1G05805.1     GRGHSRLKSQLSFTNHDSLARINEVNETPVHDGSGHSFSAASFGAATTDSWDDGSGSIGF
gm055764_Glyma2 NSNCSLLKSQLSFT-HESLS--NTVNVDP---------SSTTFG---MDPWDN--NSIAF
                . . * ******** *:**:  * **  *         *:::**    *.**:  .**.*

AT1G05805.1     TVTRPSKRSK----------DMDSGLFSQYSLP-SDTSMNYMDNFMQLPEDSVPCKIRAK
gm055764_Glyma2 SATS-TKRSKTNTNDPDILHSLNSALESQFNLPHTSLEMSTVDKLLHIPEDSVPCKIRAK
                :.*  :****          .::*.* **:.** :. .*. :*:::::************

AT1G05805.1     RGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNL
gm055764_Glyma2 RGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQVQKL
                ***************************************:************** *:*:*

AT1G05805.1     KKDQENCTCGCSEKPS
gm055764_Glyma2 HKEMENCTCGCKQSK-
                :*: *******.:.
BoxShade v3.31 C (beta, 970507) Output
AT1G05805.1     M Y Q S S S S T S S S S Q R S S L P G G G G L I R Y G S A P G S F L N S V V D E V I G G G S S N A R D F T G Y Q P S S D
gm055764_Glyma2    M Y P S S S S S S S S S S Q S M T Q - - A G L T R Y G S A P G S L L T S T V D S L I G G S - - - - - - - - - - R P S P -
 
AT1G05805.1     N F I G N F F T G A A D S S S L R S D S T T C G V N N S S D G Q K Q L G N N N N N N S N K D I F L D R S Y G G F N E I S
gm055764_Glyma2    - - - - - Y F S G E S S E S P C K E - - - - - - - - - - - - - Q R S F H N H - - - - - - - - - - - - - - - - - - - - - -
 
AT1G05805.1     Q Q H K S N D I G G G N S S G S Y S L A R Q R S S P A D F F T Y L A S D K N - N F S L N Q P T S D Y S P Q G - - G S N G
gm055764_Glyma2    - - - - - - - - - - - P P S F A S S L L R Q K S S P A G F L S H L S N H H G V G F T I - - - - - - - T P G G L S N S N S
 
AT1G05805.1     G R G H S R L K S Q L S F T N H D S L A R I N E V N E T P V H D G S G H S F S A A S F G A A T T D S W D D G S G S I G F
gm055764_Glyma2    N S N C S L L K S Q L S F T - H E S L S - - N T V N V D P - - - - - - - - - S S T T F G - - - M D P W D N - - N S I A F
 
AT1G05805.1     T V T R P S K R S K - - - - - - - - - - D M D S G L F S Q Y S L P - S D T S M N Y M D N F M Q L P E D S V P C K I R A K
gm055764_Glyma2    S A T S - T K R S K T N T N D P D I L H S L N S A L E S Q F N L P H T S L E M S T V D K L L H I P E D S V P C K I R A K
 
AT1G05805.1     R G C A T H P R S I A E R E R R T R I S G K L K K L Q D L V P N M D K Q T S Y S D M L D L A V Q H I K G L Q H Q L Q N L
gm055764_Glyma2    R G C A T H P R S I A E R E R R T R I S G K L K K L Q D L V P N M D K Q T S Y A D M L D L A V Q H I K G L Q T Q V Q K L
 
AT1G05805.1     K K D Q E N C T C G C S E K P S
gm055764_Glyma2    H K E M E N C T C G C K Q S K -
 
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