Input
| Putative repression domain
|
|
AT1G06040.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt003705 |
not found in 238aa |
AT1G06040.1 |
1st_1st |
0.620469083 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G06040.1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC
pt003705_POPTR_ MKIQCDVCEKAPATVICCADEAALCAKCDIEVHAANKLASKHQRLLLQCLSNKLPPCDIC
*************************.:****:************* *:.**.*:* ****
AT1G06040.1 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP
pt003705_POPTR_ QEKAAFIFCVEDRALFCRDCDEPIHSAGSLSANHQRFLATGIRVALSSS-CSKDTQTNSS
***************:******.** *.* ************:***:*: ***: :.*..
AT1G06040.1 EPSNNQQKANQIPAKSTSQQQQQPSSATPLPWAVDDFFHFSDIE-STDKKGQLDLGAGEL
pt003705_POPTR_ GPPN--QSAQQTPMKIPAQQ----TSSFATSWAVDDLLQFSEFESSTDKKEQLEL--GEF
*.* *.*:* * * .:** :*: . .*****:::**::* ***** **:* **:
AT1G06040.1 DWFSDMGFFGDQINDKALPAAEVPELSVSHLGHVHSYKPMKSNVSHKKPRFETRYDDDDE
pt003705_POPTR_ EWLADMGLFGEQLPQEALAAAEVPQLPISPPTNVNSCRPTKSSMPHKKPRIEI--SDDDD
:*::***:**:*: ::**.*****:*.:* :*:* :* **.:.*****:* .***:
AT1G06040.1 EHFIVPDLG
pt003705_POPTR_ EYLTVPDLG
*:: *****
BoxShade v3.31 C (beta, 970507) Output
AT1G06040.1 |
M |
K |
I |
Q |
C |
D |
V |
C |
E |
K |
A |
P |
A |
T |
V |
I |
C |
C |
A |
D |
E |
A |
A |
L |
C |
P |
Q |
C |
D |
I |
E |
I |
H |
A |
A |
N |
K |
L |
A |
S |
K |
H |
Q |
R |
L |
H |
L |
N |
S |
L |
S |
T |
K |
F |
P |
R |
C |
D |
I |
C |
pt003705_POPTR_ |
M |
K |
I |
Q |
C |
D |
V |
C |
E |
K |
A |
P |
A |
T |
V |
I |
C |
C |
A |
D |
E |
A |
A |
L |
C |
A |
K |
C |
D |
I |
E |
V |
H |
A |
A |
N |
K |
L |
A |
S |
K |
H |
Q |
R |
L |
L |
L |
Q |
C |
L |
S |
N |
K |
L |
P |
P |
C |
D |
I |
C |
|
AT1G06040.1 |
Q |
E |
K |
A |
A |
F |
I |
F |
C |
V |
E |
D |
R |
A |
L |
L |
C |
R |
D |
C |
D |
E |
S |
I |
H |
V |
A |
N |
S |
R |
S |
A |
N |
H |
Q |
R |
F |
L |
A |
T |
G |
I |
K |
V |
A |
L |
T |
S |
T |
I |
C |
S |
K |
E |
I |
E |
K |
N |
Q |
P |
pt003705_POPTR_ |
Q |
E |
K |
A |
A |
F |
I |
F |
C |
V |
E |
D |
R |
A |
L |
F |
C |
R |
D |
C |
D |
E |
P |
I |
H |
S |
A |
G |
S |
L |
S |
A |
N |
H |
Q |
R |
F |
L |
A |
T |
G |
I |
R |
V |
A |
L |
S |
S |
S |
- |
C |
S |
K |
D |
T |
Q |
T |
N |
S |
S |
|
AT1G06040.1 |
E |
P |
S |
N |
N |
Q |
Q |
K |
A |
N |
Q |
I |
P |
A |
K |
S |
T |
S |
Q |
Q |
Q |
Q |
Q |
P |
S |
S |
A |
T |
P |
L |
P |
W |
A |
V |
D |
D |
F |
F |
H |
F |
S |
D |
I |
E |
- |
S |
T |
D |
K |
K |
G |
Q |
L |
D |
L |
G |
A |
G |
E |
L |
pt003705_POPTR_ |
G |
P |
P |
N |
- |
- |
Q |
S |
A |
Q |
Q |
T |
P |
M |
K |
I |
P |
A |
Q |
Q |
- |
- |
- |
- |
T |
S |
S |
F |
A |
T |
S |
W |
A |
V |
D |
D |
L |
L |
Q |
F |
S |
E |
F |
E |
S |
S |
T |
D |
K |
K |
E |
Q |
L |
E |
L |
- |
- |
G |
E |
F |
|
AT1G06040.1 |
D |
W |
F |
S |
D |
M |
G |
F |
F |
G |
D |
Q |
I |
N |
D |
K |
A |
L |
P |
A |
A |
E |
V |
P |
E |
L |
S |
V |
S |
H |
L |
G |
H |
V |
H |
S |
Y |
K |
P |
M |
K |
S |
N |
V |
S |
H |
K |
K |
P |
R |
F |
E |
T |
R |
Y |
D |
D |
D |
D |
E |
pt003705_POPTR_ |
E |
W |
L |
A |
D |
M |
G |
L |
F |
G |
E |
Q |
L |
P |
Q |
E |
A |
L |
A |
A |
A |
E |
V |
P |
Q |
L |
P |
I |
S |
P |
P |
T |
N |
V |
N |
S |
C |
R |
P |
T |
K |
S |
S |
M |
P |
H |
K |
K |
P |
R |
I |
E |
I |
- |
- |
S |
D |
D |
D |
D |
|
AT1G06040.1 |
E |
H |
F |
I |
V |
P |
D |
L |
G |
pt003705_POPTR_ |
E |
Y |
L |
T |
V |
P |
D |
L |
G |
|
|