fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027504 not found in 339aa AT1G06040.1 1st_1st 0.481876332 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06040.1     MKIQCDVC----EKA--------PATVICCADEAALCPQCDIEIHAANKLASKHQ-----
Sb027504_Sorbi1 -----NSCGTQQEKKETKLLLFLPLYLTEIRDDEVVLVVGDLD---PGLLALAHPGACSG
                     : *    **         *  :    *: .:    *::   .. **  *      

AT1G06040.1     ------RLHLNSLSTKFPRCDICQEKAAF--IFCVE-------------DRALLCR----
Sb027504_Sorbi1 FGRPVVRRVVGRLGSEELR-NLRQRPAGLGRLLLVEEVDVGEPLQLLEPERGLLVQLVAG
                      *  :. *.::  * :: *. *.:  :: **             :*.** :    

AT1G06040.1     ----DCDESI-------------HVANSRSANH------------QRFLATGIKVALTST
Sb027504_Sorbi1 LVVGELQEVVDGPALRQELRRRGHLLRCRGGGDGGLGLRRLDGGLGRGVVVGV-VRVAGA
                    : :* :             *: ..*....             * :..*: * ::.:

AT1G06040.1     ICSKEIEKNQPEPSNNQQKANQIP---AKSTSQQQQQPSSATPLPWAVDD-FFHFSDIES
Sb027504_Sorbi1 VAAAGGGGGEPHADAGGQVALVVPGERARDVDGLVAVPAEECPVLHAEDERRFLLADVAA
                :.:     .:*... . * *  :*   *:...     *:.  *:  * *:  * ::*: :

AT1G06040.1     TDKKGQ------LDLGAGELDWFSDM----------------------------------
Sb027504_Sorbi1 GEPGGERLEREALVL-AGELVGGVDLDVAARAQRGLVGAAHHRGRRALARVALDLHGQQR
                 :  *:      * * ****    *:                                  

AT1G06040.1     ----GFFGDQINDKALPAAEVPELSVSHLGHVHSYKPMKSNVSHKKPRFETRYDDDDEEH
Sb027504_Sorbi1 RGRCGEGGQRTTKKIRPA-----------------RPLTTVV------------------
                    *  *:: ..*  **                 :*:.: *                  

AT1G06040.1     FIVPDLG
Sb027504_Sorbi1 -------
BoxShade v3.31 C (beta, 970507) Output
AT1G06040.1     M K I Q C D V C - - - - E K A - - - - - - - - P A T V I C C A D E A A L C P Q C D I E I H A A N K L A S K H Q - - - - -
Sb027504_Sorbi1    - - - - - N S C G T Q Q E K K E T K L L L F L P L Y L T E I R D D E V V L V V G D L D - - - P G L L A L A H P G A C S G
 
AT1G06040.1     - - - - - - R L H L N S L S T K F P R C D I C Q E K A A F - - I F C V E - - - - - - - - - - - - - D R A L L C R - - - -
Sb027504_Sorbi1    F G R P V V R R V V G R L G S E E L R - N L R Q R P A G L G R L L L V E E V D V G E P L Q L L E P E R G L L V Q L V A G
 
AT1G06040.1     - - - - D C D E S I - - - - - - - - - - - - - H V A N S R S A N H - - - - - - - - - - - - Q R F L A T G I K V A L T S T
Sb027504_Sorbi1    L V V G E L Q E V V D G P A L R Q E L R R R G H L L R C R G G G D G G L G L R R L D G G L G R G V V V G V - V R V A G A
 
AT1G06040.1     I C S K E I E K N Q P E P S N N Q Q K A N Q I P - - - A K S T S Q Q Q Q Q P S S A T P L P W A V D D - F F H F S D I E S
Sb027504_Sorbi1    V A A A G G G G G E P H A D A G G Q V A L V V P G E R A R D V D G L V A V P A E E C P V L H A E D E R R F L L A D V A A
 
AT1G06040.1     T D K K G Q - - - - - - L D L G A G E L D W F S D M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb027504_Sorbi1    G E P G G E R L E R E A L V L - A G E L V G G V D L D V A A R A Q R G L V G A A H H R G R R A L A R V A L D L H G Q Q R
 
AT1G06040.1     - - - - G F F G D Q I N D K A L P A A E V P E L S V S H L G H V H S Y K P M K S N V S H K K P R F E T R Y D D D D E E H
Sb027504_Sorbi1    R G R C G E G G Q R T T K K I R P A - - - - - - - - - - - - - - - - - R P L T T V V - - - - - - - - - - - - - - - - - -
 
AT1G06040.1     F I V P D L G
Sb027504_Sorbi1    - - - - - - -
 
0