fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030753 not found in 238aa AT1G06040.1 1st_1st 0.607675906 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06040.1     MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC
gm030753_Glyma1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPRCDIC
                *************************.:**:*:************* *:.**.*:******

AT1G06040.1     QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP
gm030753_Glyma1 QDKPAFIFCVEDRALFCKDCDEPIHLASSLSANHQRFLATGIRVALGSN-CTKGHEKGNM
                *:*.***********:*:****.**:*.* ************:*** *. *:*  **.: 

AT1G06040.1     EPSNNQQKANQIPAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDKKGQLDLGAGELD
gm030753_Glyma1 EPSN--PNAQEVPVKTPSQQVPSFTSS----WAVDDLLELTDFESPDKKQSLEF--GELE
                ****   :*:::*.*:.***  . :*:    *****::.::*:**.*** .*::  ***:

AT1G06040.1     WFSDMGFFGDQINDKALPAAEVPELSVSHLGHVHSYKPMKSNVSHKKPRFETRYDDDDEE
gm030753_Glyma1 WLADAGLFSEQFPHEALVAAEVPQLPVPHTSSVASHKAPKSLVSYKKPRIEV-LDEDDDE
                *::* *:*.:*: .:** *****:*.*.* . * *:*. ** **:****:*.  *:**:*

AT1G06040.1     HFIVPDLG
gm030753_Glyma1 HCTVPDLG
                *  *****
BoxShade v3.31 C (beta, 970507) Output
AT1G06040.1     M K I Q C D V C E K A P A T V I C C A D E A A L C P Q C D I E I H A A N K L A S K H Q R L H L N S L S T K F P R C D I C
gm030753_Glyma1    M K I Q C D V C E K A P A T V I C C A D E A A L C A K C D V E V H A A N K L A S K H Q R L L L Q C L S N K L P R C D I C
 
AT1G06040.1     Q E K A A F I F C V E D R A L L C R D C D E S I H V A N S R S A N H Q R F L A T G I K V A L T S T I C S K E I E K N Q P
gm030753_Glyma1    Q D K P A F I F C V E D R A L F C K D C D E P I H L A S S L S A N H Q R F L A T G I R V A L G S N - C T K G H E K G N M
 
AT1G06040.1     E P S N N Q Q K A N Q I P A K S T S Q Q Q Q Q P S S A T P L P W A V D D F F H F S D I E S T D K K G Q L D L G A G E L D
gm030753_Glyma1    E P S N - - P N A Q E V P V K T P S Q Q V P S F T S S - - - - W A V D D L L E L T D F E S P D K K Q S L E F - - G E L E
 
AT1G06040.1     W F S D M G F F G D Q I N D K A L P A A E V P E L S V S H L G H V H S Y K P M K S N V S H K K P R F E T R Y D D D D E E
gm030753_Glyma1    W L A D A G L F S E Q F P H E A L V A A E V P Q L P V P H T S S V A S H K A P K S L V S Y K K P R I E V - L D E D D D E
 
AT1G06040.1     H F I V P D L G
gm030753_Glyma1    H C T V P D L G
 
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