fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030753 not found in 238aa AT1G06040.1 1st_1st 0.607675906 Ia
Gm040996 not found in 240aa AT1G06040.1 not_1st 0.599147121 II
Gm032809 not found in 238aa AT1G06040.1 not_1st 0.599147121 II
Gm038135 not found in 239aa AT1G06040.1 not_1st 0.590618336 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G06040.1     MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC
gm030753_Glyma1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPRCDIC
gm038135_Glyma1 MKIQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSSKLPRCDIC
gm032809_Glyma1 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQSLSNKLPRCDIC
gm040996_Glyma1 MKIQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSSKLPTCDIC
                *********:***************.:**:*:************* *:.**.*:* ****

AT1G06040.1     QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP
gm030753_Glyma1 QDKPAFIFCVEDRALFCKDCDEPIHLASSLSANHQRFLATGIRVALGSN-CTKGHEKGNM
gm038135_Glyma1 QDKPAFIFCVEDRALFCQDCDEPIHSAGSLSANHQRFLATGIRVASSSN-CTKDNEKSHL
gm032809_Glyma1 QDKPAFIFCVEDRALFCKDCDEPIHLASSLSANHQRFLATGIRVALGSN-CTKGNEKGHV
gm040996_Glyma1 QDKPAFIFCVEDRALFCQDCDEPIHSAGSLSANHQRFLATGIRVASSSN-CTKDNEKSHS
                *:*.***********:*:****.** *.* ************:**  *. *:*  **.: 

AT1G06040.1     EPSNNQQKANQIPAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDKKGQLDLGAGELD
gm030753_Glyma1 EPSN--PNAQEVPVKTPSQQVPSFTSS----WAVDDLLELTDFESPDK--KQSLEFGELE
gm038135_Glyma1 EPPT--RNAQQVSAKIPPQQVPSFTSS----WAVDDLLELTAFESPEK--KESLQFGELE
gm032809_Glyma1 EPSK--PKAQEVPAKIPSQQVPSFTSS----WAVDDLLELTDFESPDKVQKQSLEFGELE
gm040996_Glyma1 EPPN--RSAQQVSAKIPPQQVPSFTSS----WAVDDLLELTGFESPEK--KESLQFGELE
                **..   .*:::..* ..**  . :*:    *****::.:: :**.:*  : .*  ***:

AT1G06040.1     WFSDMGFFGDQINDKALPAAEVPELSVSH-LGHVHSYKPMKSNVSHKKPRFETRYDDDDE
gm030753_Glyma1 WLADAGLFSEQFPHEALVAAEVPQLPVPH-TSSVASHKAPKSLVSYKKPRIEVLD-EDDD
gm038135_Glyma1 WLTDVGIFGEQFAQEALAAAEVPQLPVTHNSSSVASYRTSKSYMSHKKPRIEVLN-DDDD
gm032809_Glyma1 WLADVGLFGEQFPHEALAAAEVPQLPM---TSSVGSHKAPKSLLSYKKPRIEVLD-EDDD
gm040996_Glyma1 WLTDVGIFGEQFAQEALAAAEVPQLPETHNSSSVASYKTSKSYMSHKKPRIEVLNDDDDD
                *::* *:*.:*: .:** *****:*.     . * *::. ** :*:****:*.   :**:

AT1G06040.1     EHFIVPDLG
gm030753_Glyma1 EHCTVPDLG
gm038135_Glyma1 EYFTVPDLG
gm032809_Glyma1 EHFTVPDLG
gm040996_Glyma1 EYFTVPDLG
                *:  *****
BoxShade v3.31 C (beta, 970507) Output
AT1G06040.1     M K I Q C D V C E K A P A T V I C C A D E A A L C P Q C D I E I H A A N K L A S K H Q R L H L N S L S T K F P R C D I C
gm030753_Glyma1    M K I Q C D V C E K A P A T V I C C A D E A A L C A K C D V E V H A A N K L A S K H Q R L L L Q C L S N K L P R C D I C
gm038135_Glyma1    M K I Q C D V C E R A P A T V I C C A D E A A L C A K C D V E V H A A N K L A S K H Q R L L L Q C L S S K L P R C D I C
gm032809_Glyma1    M K I Q C D V C E K A P A T V I C C A D E A A L C A K C D V E V H A A N K L A S K H Q R L L L Q S L S N K L P R C D I C
gm040996_Glyma1    M K I Q C D V C E R A P A T V I C C A D E A A L C A K C D V E V H A A N K L A S K H Q R L L L Q C L S S K L P T C D I C
 
AT1G06040.1     Q E K A A F I F C V E D R A L L C R D C D E S I H V A N S R S A N H Q R F L A T G I K V A L T S T I C S K E I E K N Q P
gm030753_Glyma1    Q D K P A F I F C V E D R A L F C K D C D E P I H L A S S L S A N H Q R F L A T G I R V A L G S N - C T K G H E K G N M
gm038135_Glyma1    Q D K P A F I F C V E D R A L F C Q D C D E P I H S A G S L S A N H Q R F L A T G I R V A S S S N - C T K D N E K S H L
gm032809_Glyma1    Q D K P A F I F C V E D R A L F C K D C D E P I H L A S S L S A N H Q R F L A T G I R V A L G S N - C T K G N E K G H V
gm040996_Glyma1    Q D K P A F I F C V E D R A L F C Q D C D E P I H S A G S L S A N H Q R F L A T G I R V A S S S N - C T K D N E K S H S
 
AT1G06040.1     E P S N N Q Q K A N Q I P A K S T S Q Q Q Q Q P S S A T P L P W A V D D F F H F S D I E S T D K K G Q L D L G A G E L D
gm030753_Glyma1    E P S N - - P N A Q E V P V K T P S Q Q V P S F T S S - - - - W A V D D L L E L T D F E S P D K - - K Q S L E F G E L E
gm038135_Glyma1    E P P T - - R N A Q Q V S A K I P P Q Q V P S F T S S - - - - W A V D D L L E L T A F E S P E K - - K E S L Q F G E L E
gm032809_Glyma1    E P S K - - P K A Q E V P A K I P S Q Q V P S F T S S - - - - W A V D D L L E L T D F E S P D K V Q K Q S L E F G E L E
gm040996_Glyma1    E P P N - - R S A Q Q V S A K I P P Q Q V P S F T S S - - - - W A V D D L L E L T G F E S P E K - - K E S L Q F G E L E
 
AT1G06040.1     W F S D M G F F G D Q I N D K A L P A A E V P E L S V S H - L G H V H S Y K P M K S N V S H K K P R F E T R Y D D D D E
gm030753_Glyma1    W L A D A G L F S E Q F P H E A L V A A E V P Q L P V P H - T S S V A S H K A P K S L V S Y K K P R I E V L D - E D D D
gm038135_Glyma1    W L T D V G I F G E Q F A Q E A L A A A E V P Q L P V T H N S S S V A S Y R T S K S Y M S H K K P R I E V L N - D D D D
gm032809_Glyma1    W L A D V G L F G E Q F P H E A L A A A E V P Q L P M - - - T S S V G S H K A P K S L L S Y K K P R I E V L D - E D D D
gm040996_Glyma1    W L T D V G I F G E Q F A Q E A L A A A E V P Q L P E T H N S S S V A S Y K T S K S Y M S H K K P R I E V L N D D D D D
 
AT1G06040.1     E H F I V P D L G
gm030753_Glyma1    E H C T V P D L G
gm038135_Glyma1    E Y F T V P D L G
gm032809_Glyma1    E H F T V P D L G
gm040996_Glyma1    E Y F T V P D L G
 
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