fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm017123 TTENNELKLRLTAMEQ in 191/286 AT1G06070.1 1st_1st 0.377777777 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06070.1     MDKEKSPAPPPSGGLPPPSGRYSAFSPNGSSFAMKAESSFPPLTPSGSNSSDANRFSHDI
Sm017123_Selmo1 ----------------------------------------------------------DV
                                                                          *:

AT1G06070.1     SRMPDNPPKNLGHRRAHSEI-LTLPDDLSFDSDLGVVGAADGPSFSDDTDEDLLYMYLDM
Sm017123_Selmo1 NRMPDAPPRPRGHRRAQSEITFCLPDDASFERELGLQSPA-MPALSDEAGEDLFNMYIDM
                .**** **:  *****:*** : **** **: :**: ..*  *::**::.***: **:**

AT1G06070.1     EKFNSSATSTSQMGEPSEPTWRNELASTSNLQSTPGSSSERPRIRHQHSQSMDGSTTIKP
Sm017123_Selmo1 EKINSF-----------------NVASATPTKSDGNSNSEPRRPRHHHSNSMD---SFKS
                **:**                  ::**::  :*  .*.**  * **:**:***   ::*.

AT1G06070.1     EMLMSGNEDVSGVDSKKAISAAKLSELALIDPKRAKRIWANRQSAARSKERKMRYIAELE
Sm017123_Selmo1 DFL---NSESDSTEAKKALAASKLAELALIDPKRAKRILANRQSAARSKERKMRYISELE
                ::*   *.: ...::***::*:**:************* *****************:***

AT1G06070.1     RKVQTLQTEATSLSAQLTLLQRDTNGLGVENNELKLRVQTMEQQVHLQDALNDALKEEVQ
Sm017123_Selmo1 RKVQTLQTEATTLSAQLTMLQRDTTGLTTENNELKLRLTAMEQQGQLRDALNDALKEEVQ
                ***********:******:*****.** .********: :**** :*:************

AT1G06070.1     HLKVLTGQ--GPSNGTSMNYGSFGSNQQFYPNNQSMHTILAAQQLQQLQIQSQKQQQQQQ
Sm017123_Selmo1 RLKLATGQLTGPG----------GQQQQLSINAQYFQM----QQLQQLQQQAQNAIDSQQ
                :**: ***  **.          *.:**:  * * ::     ******* *:*:  :.**

AT1G06070.1     QHQQQQQQQQQQFHFQQQQLYQLQQQQRLQQQEQQSGASELRRPMPSPGQKESVTSPDRE
Sm017123_Selmo1 QQQSQRSPPSQ------------------PQQQQQPGAHP--------------------
                *:*.*:.  .*                   **:**.**                      

AT1G06070.1     TPLTKD
Sm017123_Selmo1 ------
BoxShade v3.31 C (beta, 970507) Output
AT1G06070.1     M D K E K S P A P P P S G G L P P P S G R Y S A F S P N G S S F A M K A E S S F P P L T P S G S N S S D A N R F S H D I
Sm017123_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D V
 
AT1G06070.1     S R M P D N P P K N L G H R R A H S E I - L T L P D D L S F D S D L G V V G A A D G P S F S D D T D E D L L Y M Y L D M
Sm017123_Selmo1    N R M P D A P P R P R G H R R A Q S E I T F C L P D D A S F E R E L G L Q S P A - M P A L S D E A G E D L F N M Y I D M
 
AT1G06070.1     E K F N S S A T S T S Q M G E P S E P T W R N E L A S T S N L Q S T P G S S S E R P R I R H Q H S Q S M D G S T T I K P
Sm017123_Selmo1    E K I N S F - - - - - - - - - - - - - - - - - N V A S A T P T K S D G N S N S E P R R P R H H H S N S M D - - - S F K S
 
AT1G06070.1     E M L M S G N E D V S G V D S K K A I S A A K L S E L A L I D P K R A K R I W A N R Q S A A R S K E R K M R Y I A E L E
Sm017123_Selmo1    D F L - - - N S E S D S T E A K K A L A A S K L A E L A L I D P K R A K R I L A N R Q S A A R S K E R K M R Y I S E L E
 
AT1G06070.1     R K V Q T L Q T E A T S L S A Q L T L L Q R D T N G L G V E N N E L K L R V Q T M E Q Q V H L Q D A L N D A L K E E V Q
Sm017123_Selmo1    R K V Q T L Q T E A T T L S A Q L T M L Q R D T T G L T T E N N E L K L R L T A M E Q Q G Q L R D A L N D A L K E E V Q
 
AT1G06070.1     H L K V L T G Q - - G P S N G T S M N Y G S F G S N Q Q F Y P N N Q S M H T I L A A Q Q L Q Q L Q I Q S Q K Q Q Q Q Q Q
Sm017123_Selmo1    R L K L A T G Q L T G P G - - - - - - - - - - G Q Q Q Q L S I N A Q Y F Q M - - - - Q Q L Q Q L Q Q Q A Q N A I D S Q Q
 
AT1G06070.1     Q H Q Q Q Q Q Q Q Q Q Q F H F Q Q Q Q L Y Q L Q Q Q Q R L Q Q Q E Q Q S G A S E L R R P M P S P G Q K E S V T S P D R E
Sm017123_Selmo1    Q Q Q S Q R S P P S Q - - - - - - - - - - - - - - - - - - P Q Q Q Q Q P G A H P - - - - - - - - - - - - - - - - - - - -
 
AT1G06070.1     T P L T K D
Sm017123_Selmo1    - - - - - -
 
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