fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003575 TSENSELKLRLQTMEQ in 284/424 AT1G06070.1 1st_1st 0.709629629 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06070.1     MDKEKSPAPPPSGGLPPPSGRYSAFSPNGSSFAMKAE---SSFPPLTPSGS-------NS
pt003575_POPTR_ MDKDKS-ASHHSSGLPPPPGRYSSFSPSGSSFNLKPEQSPSTFPPMAPGSSPDPNHFGHG
                ***:** *.  *.*****.****:***.**** :*.*   *:***::*..*       :.

AT1G06070.1     SDANRFSHDISRMPDNPPKNLGHRRAHSEILTLPDDLSFDSDLGVV-GAADGPSFSDDTD
pt003575_POPTR_ SDSNRFSHDISRMPDNPPKNLGHRRAHSEILTLPDDISFDSDLGVVGGGADGPTFSDETE
                **:*********************************:********* *.****:***:*:

AT1G06070.1     EDLLYMYLDMEKFN-SSATSTSQMGEPSEPTWRNE----LASTSNLQSTPGSSSERPRIR
pt003575_POPTR_ EDLLSMYLDMDKFNSSSATSTFQVGESLAPAMAAQAMAPLPAAVSLGAGP---SERPRVR
                **** *****:*** ****** *:**.  *:   :    *.:: .* : *   *****:*

AT1G06070.1     HQHSQSMDGSTTIKPEMLMSGNEDVSGVDSKKAISAAKLSELALIDPKRAKRIWANRQSA
pt003575_POPTR_ HQHSQSMDGSTTIKPEMLMSGSEEASPADSKKAVSAAKLAELALIDPKRAKRIWANRQSA
                *********************.*:.* .*****:*****:********************

AT1G06070.1     ARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLGVENNELKLRVQTMEQQV
pt003575_POPTR_ ARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTSENSELKLRLQTMEQQV
                ******************************************  **.*****:*******

AT1G06070.1     HLQDALNDALKEEVQHLKVLTGQGPSNGTSMNYGSFGSNQQFYPNNQSMHTILAAQQLQQ
pt003575_POPTR_ HLQDALNDALKEEIQHLKVLTGQTPNGGPMMNYASFGGGQQLYPNNQAMHTFLAAQQFQQ
                *************:********* *..*. ***.***..**:*****:***:*****:**

AT1G06070.1     LQIQSQKQQQQQQQHQQQQQQQQQQFHFQQQQLYQLQQQQRLQQQEQQSGASELRRPMPS
pt003575_POPTR_ LQIHSQK--------QQQQQQQQQQFQLHQLQQQQLQQQQE-QQQQQQGGDLKMRGSLTS
                ***:***        ***********:::* *  ******. ***:**.*  ::* .:.*

AT1G06070.1     PGQKESVTSPDRETPLTKD
pt003575_POPTR_ SSQKDNGSEANSSS--SKD
                ..**:. :..: .:  :**
BoxShade v3.31 C (beta, 970507) Output
AT1G06070.1     M D K E K S P A P P P S G G L P P P S G R Y S A F S P N G S S F A M K A E - - - S S F P P L T P S G S - - - - - - - N S
pt003575_POPTR_    M D K D K S - A S H H S S G L P P P P G R Y S S F S P S G S S F N L K P E Q S P S T F P P M A P G S S P D P N H F G H G
 
AT1G06070.1     S D A N R F S H D I S R M P D N P P K N L G H R R A H S E I L T L P D D L S F D S D L G V V - G A A D G P S F S D D T D
pt003575_POPTR_    S D S N R F S H D I S R M P D N P P K N L G H R R A H S E I L T L P D D I S F D S D L G V V G G G A D G P T F S D E T E
 
AT1G06070.1     E D L L Y M Y L D M E K F N - S S A T S T S Q M G E P S E P T W R N E - - - - L A S T S N L Q S T P G S S S E R P R I R
pt003575_POPTR_    E D L L S M Y L D M D K F N S S S A T S T F Q V G E S L A P A M A A Q A M A P L P A A V S L G A G P - - - S E R P R V R
 
AT1G06070.1     H Q H S Q S M D G S T T I K P E M L M S G N E D V S G V D S K K A I S A A K L S E L A L I D P K R A K R I W A N R Q S A
pt003575_POPTR_    H Q H S Q S M D G S T T I K P E M L M S G S E E A S P A D S K K A V S A A K L A E L A L I D P K R A K R I W A N R Q S A
 
AT1G06070.1     A R S K E R K M R Y I A E L E R K V Q T L Q T E A T S L S A Q L T L L Q R D T N G L G V E N N E L K L R V Q T M E Q Q V
pt003575_POPTR_    A R S K E R K M R Y I A E L E R K V Q T L Q T E A T S L S A Q L T L L Q R D T N G L T S E N S E L K L R L Q T M E Q Q V
 
AT1G06070.1     H L Q D A L N D A L K E E V Q H L K V L T G Q G P S N G T S M N Y G S F G S N Q Q F Y P N N Q S M H T I L A A Q Q L Q Q
pt003575_POPTR_    H L Q D A L N D A L K E E I Q H L K V L T G Q T P N G G P M M N Y A S F G G G Q Q L Y P N N Q A M H T F L A A Q Q F Q Q
 
AT1G06070.1     L Q I Q S Q K Q Q Q Q Q Q Q H Q Q Q Q Q Q Q Q Q Q F H F Q Q Q Q L Y Q L Q Q Q Q R L Q Q Q E Q Q S G A S E L R R P M P S
pt003575_POPTR_    L Q I H S Q K - - - - - - - - Q Q Q Q Q Q Q Q Q Q F Q L H Q L Q Q Q Q L Q Q Q Q E - Q Q Q Q Q Q G G D L K M R G S L T S
 
AT1G06070.1     P G Q K E S V T S P D R E T P L T K D
pt003575_POPTR_    S S Q K D N G S E A N S S S - - S K D
 
0