fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002978 not found in 228aa AT3G23240.1 1st_not 0.450847457 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06160.1     ME----YQTNFLSGEFSPENSSSSSWSSQESFLWEESFLHQSFDQSFLLSSPTDNYCDDF
pt002978_POPTR_ MESSLFYHDQYLNSDFSPE----CSFGSLDSFSWDE-LLFQSNSLPF-----NTNDSEEM
                **    *: ::*..:****    .*:.* :** *:* :*.** . .*     . * .:::

AT1G06160.1     FAF---------------ESSIIKEEGKEATVAAEEE-----EKSYRGVRKRPWGKFAAE
pt002978_POPTR_ VLFNALANGPPKESSESNSSSGIKEE--EVTSNAKEEEEAKREKSYRGVRRRPWGKYAAE
                . *               .** ****  *.*  *:**     ********:*****:***

AT1G06160.1     IRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLN
pt002978_POPTR_ IRDSTRNGIRVWLGTFDSAEAAALAYDQAAFSMRGSMAVLNFPVEMVRESLQDM-NYRCE
                ******:**********:*************:::**:******.::*.***:.* * . :

AT1G06160.1     DGESPVIALKRKHSMRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVV
pt002978_POPTR_ DGCSPVVALKRKHSMR-----RKSKSWKTKVNQVP-----------------HSRPQNV-
                ** ***:*********     :*..* .:.:.. *                 :** *.* 

AT1G06160.1     MTQESNTTLVVLEDLGAEYLEELMRSCS-----
pt002978_POPTR_ ---------VVLEDLGADYLEELLNSCDTSNSW
                         ********:*****:.**.
BoxShade v3.31 C (beta, 970507) Output
AT1G06160.1     M E - - - - Y Q T N F L S G E F S P E N S S S S S W S S Q E S F L W E E S F L H Q S F D Q S F L L S S P T D N Y C D D F
pt002978_POPTR_    M E S S L F Y H D Q Y L N S D F S P E - - - - C S F G S L D S F S W D E - L L F Q S N S L P F - - - - - N T N D S E E M
 
AT1G06160.1     F A F - - - - - - - - - - - - - - - E S S I I K E E G K E A T V A A E E E - - - - - E K S Y R G V R K R P W G K F A A E
pt002978_POPTR_    V L F N A L A N G P P K E S S E S N S S S G I K E E - - E V T S N A K E E E E A K R E K S Y R G V R R R P W G K Y A A E
 
AT1G06160.1     I R D S T R K G I R V W L G T F D T A E A A A L A Y D Q A A F A L K G S L A V L N F P A D V V E E S L R K M E N V N L N
pt002978_POPTR_    I R D S T R N G I R V W L G T F D S A E A A A L A Y D Q A A F S M R G S M A V L N F P V E M V R E S L Q D M - N Y R C E
 
AT1G06160.1     D G E S P V I A L K R K H S M R N R P R G K K K S S S S S T L T S S P S S S S S Y S S S S S S S S L S S R S R K Q S V V
pt002978_POPTR_    D G C S P V V A L K R K H S M R - - - - - R K S K S W K T K V N Q V P - - - - - - - - - - - - - - - - - H S R P Q N V -
 
AT1G06160.1     M T Q E S N T T L V V L E D L G A E Y L E E L M R S C S - - - - -
pt002978_POPTR_    - - - - - - - - - V V L E D L G A D Y L E E L L N S C D T S N S W
 
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