fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002978 not found in 228aa AT3G23240.1 1st_not 0.450847457 II
Pt039080 not found in 226aa AT3G23240.1 not_not 0.437288135 III
Pt014882 not found in 225aa AT3G23240.1 not_not 0.433898305 III
Pt041336 not found in 258aa AT3G23240.1 not_not 0.420338983 III
Pt012575 not found in 225aa AT3G23240.1 not_not 0.406779661 III
Pt035026 not found in 221aa AT3G23240.1 not_not 0.403389830 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G06160.1     --------------------------------------ME----YQTNFLSGEFSPENSS
pt014882_POPTR_ --------------------------------------MDSSFFHYQ---NSQFSPES--
pt039080_POPTR_ --------------------------------------MEPSLFYHNQYLNSDLSPE---
pt041336_POPTR_ MEKHIYGEKLLKALQENRKPQKTQIAGQTENQPPQPIQMDGSFFHSS---NSDFSFE---
pt012575_POPTR_ --------------------------------------MDSSYFHSQ---NSQFFPGS--
pt002978_POPTR_ --------------------------------------MESSLFYHDQYLNSDFSPE---
pt035026_POPTR_ --------------------------------------MDASIFHSA---NSDFSSE---
                                                      *:    :     ..::      

AT1G06160.1     SSSWSSQESFLWEESFLHQSFDQSFLLSSPTDNYCDDFFAF----------------ESS
pt014882_POPTR_ SSSFNSLDSSSCNA----QNFYSQPLPFNENDS--QEMLLL-GLLNEAPINSFDTTSSTN
pt039080_POPTR_ -SSFGSLDSFPWDD-----LFQSSSLPFNTSDS--GEMVLFNDLGADGAKESSESNSSSG
pt041336_POPTR_ -SCFESPDFFHGQS------FNQSSLPFNENDS--DEMLLF-GLISEATQETSKATSYNG
pt012575_POPTR_ SSSFNSLDSFSCNV----QNFYSQPLPFNENDS--QEMLLS-GVPNEPPINSFDTSSSTN
pt002978_POPTR_ -CSFGSLDSFSWDE----LLFQSNSLPFNTNDS--EEMVLFNALANGPPKESSESNSSSG
pt035026_POPTR_ -SCFRSPDSFYSQS------FNQSSLPFNENDS--DEMLLF-ELISEATQETSRTTFCNG
                 ..: * :    :       * .. *  . .*.   ::.                   ..

AT1G06160.1     IIKEEGKEATVAA--EEE---EKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEA
pt014882_POPTR_ S-NYD--EVSSRADYQGEQPREISYRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDTAEA
pt039080_POPTR_ I-KEE--EVTSNAK-EEEPKKEKSYRGVRRRPWGKYAAEIRDSTRNGVRVWLGTFDSAEA
pt041336_POPTR_ IIKEE--EVSSVA--EEDPNKEKSYRGVRRRPWGKFAAEIRDSTRHGVRVWLGTFDSAEA
pt012575_POPTR_ T-NYD--EASSRANYQEEPPQEIAYRGVRRRPWGKYAAEIRDSTRKHVRVWLGTFDTAEA
pt002978_POPTR_ I-KEE--EVTSNAKEEEEAKREKSYRGVRRRPWGKYAAEIRDSTRNGIRVWLGTFDSAEA
pt035026_POPTR_ IVKEE--EVSSVA--KRTPDKEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFDSAEA
                  : :  *.:  *  :     * :*****:*****:*********: :********:***

AT1G06160.1     AALAYDQAAFALKGSLAVLNFPADVVEESLRKME-----NVNLNDGESPVIALKRKHSMR
pt014882_POPTR_ AALAYDQAAFAMRGSMAVLNFPAQKVYESLKETGYGF------QEGQSPILAMKKRHSMN
pt039080_POPTR_ AALAYDQAAFSMRGSMAVLNFSVEMVRESLEDMKYRC------EDGCSPVVALKRRHSVR
pt041336_POPTR_ AALAYDQAAFSMRGTGATLNFPVERVRESLKDMK--CTDQ---EDGCSPVVALKRKHSMR
pt012575_POPTR_ AALAYDQAAFTIRGSMAVLNFPVQKVYESLQQMGYGF------QEGQSPIVAMKKRHSMN
pt002978_POPTR_ AALAYDQAAFSMRGSMAVLNFPVEMVRESLQDMNYRC------EDGCSPVVALKRKHSMR
pt035026_POPTR_ AALAYDQAAFSMRGPGTILNFPVERVRESLKDMK--CSHH--YEDGCSPVVALKRKYSMR
                **********:::*. : ***..: * ***..           ::* **::*:*:::*:.

AT1G06160.1     NRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVV-MTQESNTTLVVLEDL
pt014882_POPTR_ RK-------------------------------AESRKRKEKEI-RTEVEN--VVVLEDL
pt039080_POPTR_ RK-------------------------------STSRKSKVNQVANTRQQN--VVVLEDL
pt041336_POPTR_ RK-------------------------------LGSRSKKES---NVRIEN--VMVLEDL
pt012575_POPTR_ RK-------------------------------AESRKRKEKGT-RIGMEN--VVVLEDL
pt002978_POPTR_ RK-------------------------------SKSWKTKVNQVPHSRPQN--VVVLEDL
pt035026_POPTR_ RK-------------------------------LGSRGKKER---NARIEN--VVVLEDL
                .:                                 *   *         .*  ::*****

AT1G06160.1     GAEYLEELMRSCS------
pt014882_POPTR_ GAEYLEELLAISESASPW-
pt039080_POPTR_ GADYLEELLNSCESSSSW-
pt041336_POPTR_ GADYLEHLLNSSEDAVSPC
pt012575_POPTR_ GADYLEDLLTISESARPS-
pt002978_POPTR_ GADYLEELLNSCDTSNSW-
pt035026_POPTR_ GADYLEQLLNSSGKATSPW
                **:***.*:  .
BoxShade v3.31 C (beta, 970507) Output
AT1G06160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E - - - - Y Q T N F L S G E F S P E N S S
pt014882_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D S S F F H Y Q - - - N S Q F S P E S - -
pt039080_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E P S L F Y H N Q Y L N S D L S P E - - -
pt041336_POPTR_    M E K H I Y G E K L L K A L Q E N R K P Q K T Q I A G Q T E N Q P P Q P I Q M D G S F F H S S - - - N S D F S F E - - -
pt012575_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D S S Y F H S Q - - - N S Q F F P G S - -
pt002978_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E S S L F Y H D Q Y L N S D F S P E - - -
pt035026_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D A S I F H S A - - - N S D F S S E - - -
 
AT1G06160.1     S S S W S S Q E S F L W E E S F L H Q S F D Q S F L L S S P T D N Y C D D F F A F - - - - - - - - - - - - - - - - E S S
pt014882_POPTR_    S S S F N S L D S S S C N A - - - - Q N F Y S Q P L P F N E N D S - - Q E M L L L - G L L N E A P I N S F D T T S S T N
pt039080_POPTR_    - S S F G S L D S F P W D D - - - - - L F Q S S S L P F N T S D S - - G E M V L F N D L G A D G A K E S S E S N S S S G
pt041336_POPTR_    - S C F E S P D F F H G Q S - - - - - - F N Q S S L P F N E N D S - - D E M L L F - G L I S E A T Q E T S K A T S Y N G
pt012575_POPTR_    S S S F N S L D S F S C N V - - - - Q N F Y S Q P L P F N E N D S - - Q E M L L S - G V P N E P P I N S F D T S S S T N
pt002978_POPTR_    - C S F G S L D S F S W D E - - - - L L F Q S N S L P F N T N D S - - E E M V L F N A L A N G P P K E S S E S N S S S G
pt035026_POPTR_    - S C F R S P D S F Y S Q S - - - - - - F N Q S S L P F N E N D S - - D E M L L F - E L I S E A T Q E T S R T T F C N G
 
AT1G06160.1     I I K E E G K E A T V A A - - E E E - - - E K S Y R G V R K R P W G K F A A E I R D S T R K G I R V W L G T F D T A E A
pt014882_POPTR_    S - N Y D - - E V S S R A D Y Q G E Q P R E I S Y R G V R R R P W G K Y A A E I R D S T R N G V R V W L G T F D T A E A
pt039080_POPTR_    I - K E E - - E V T S N A K - E E E P K K E K S Y R G V R R R P W G K Y A A E I R D S T R N G V R V W L G T F D S A E A
pt041336_POPTR_    I I K E E - - E V S S V A - - E E D P N K E K S Y R G V R R R P W G K F A A E I R D S T R H G V R V W L G T F D S A E A
pt012575_POPTR_    T - N Y D - - E A S S R A N Y Q E E P P Q E I A Y R G V R R R P W G K Y A A E I R D S T R K H V R V W L G T F D T A E A
pt002978_POPTR_    I - K E E - - E V T S N A K E E E E A K R E K S Y R G V R R R P W G K Y A A E I R D S T R N G I R V W L G T F D S A E A
pt035026_POPTR_    I V K E E - - E V S S V A - - K R T P D K E K S Y R G V R R R P W G K F A A E I R D S T R N G I R V W L G T F D S A E A
 
AT1G06160.1     A A L A Y D Q A A F A L K G S L A V L N F P A D V V E E S L R K M E - - - - - N V N L N D G E S P V I A L K R K H S M R
pt014882_POPTR_    A A L A Y D Q A A F A M R G S M A V L N F P A Q K V Y E S L K E T G Y G F - - - - - - Q E G Q S P I L A M K K R H S M N
pt039080_POPTR_    A A L A Y D Q A A F S M R G S M A V L N F S V E M V R E S L E D M K Y R C - - - - - - E D G C S P V V A L K R R H S V R
pt041336_POPTR_    A A L A Y D Q A A F S M R G T G A T L N F P V E R V R E S L K D M K - - C T D Q - - - E D G C S P V V A L K R K H S M R
pt012575_POPTR_    A A L A Y D Q A A F T I R G S M A V L N F P V Q K V Y E S L Q Q M G Y G F - - - - - - Q E G Q S P I V A M K K R H S M N
pt002978_POPTR_    A A L A Y D Q A A F S M R G S M A V L N F P V E M V R E S L Q D M N Y R C - - - - - - E D G C S P V V A L K R K H S M R
pt035026_POPTR_    A A L A Y D Q A A F S M R G P G T I L N F P V E R V R E S L K D M K - - C S H H - - Y E D G C S P V V A L K R K Y S M R
 
AT1G06160.1     N R P R G K K K S S S S S T L T S S P S S S S S Y S S S S S S S S L S S R S R K Q S V V - M T Q E S N T T L V V L E D L
pt014882_POPTR_    R K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A E S R K R K E K E I - R T E V E N - - V V V L E D L
pt039080_POPTR_    R K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S T S R K S K V N Q V A N T R Q Q N - - V V V L E D L
pt041336_POPTR_    R K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L G S R S K K E S - - - N V R I E N - - V M V L E D L
pt012575_POPTR_    R K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A E S R K R K E K G T - R I G M E N - - V V V L E D L
pt002978_POPTR_    R K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S K S W K T K V N Q V P H S R P Q N - - V V V L E D L
pt035026_POPTR_    R K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L G S R G K K E R - - - N A R I E N - - V V V L E D L
 
AT1G06160.1     G A E Y L E E L M R S C S - - - - - -
pt014882_POPTR_    G A E Y L E E L L A I S E S A S P W -
pt039080_POPTR_    G A D Y L E E L L N S C E S S S S W -
pt041336_POPTR_    G A D Y L E H L L N S S E D A V S P C
pt012575_POPTR_    G A D Y L E D L L T I S E S A R P S -
pt002978_POPTR_    G A D Y L E E L L N S C D T S N S W -
pt035026_POPTR_    G A D Y L E Q L L N S S G K A T S P W
 
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