fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052299 not found in 174aa AT2G31230.1 1st_not 0.454237288 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06160.1     ------MEYQTNFLSGEFSPENSSSSSWSSQESFLWEESFLHQSFDQSFLLSSPTDNYCD
gm052299_Glyma1 MFPVLLVASKGQSVSLSLSSSSSSLPLLPSQQA---------------------------
                      :  : : :* .:*...** .  .**::                           

AT1G06160.1     DFFAFESSIIKEEGKEATVAAEEEEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDT
gm052299_Glyma1 ----------------------KEQKMYRGVRKRPWGKFAAEIRDSTRNGVRVWIGTFDT
                                      :*:* *********************:*:***:*****

AT1G06160.1     AEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMRNR
gm052299_Glyma1 AEAAALAYDQAAFSTRGSLAVLNFPEEVVSESLKDMPSKPWEEGSSPVLALKRKHTMRRK
                *************: :********* :**.***:.* .   ::*.***:******:**.:

AT1G06160.1     PRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDLGAE
gm052299_Glyma1 SNSKKKSKIDQ------REQLDFSSSSQN---------------------VLVFEDLGAE
                ...****. ..       .. .:****..                     ::*:******

AT1G06160.1     YLEELMRSCS
gm052299_Glyma1 YLEQLLSLTS
                ***:*:   *
BoxShade v3.31 C (beta, 970507) Output
AT1G06160.1     - - - - - - M E Y Q T N F L S G E F S P E N S S S S S W S S Q E S F L W E E S F L H Q S F D Q S F L L S S P T D N Y C D
gm052299_Glyma1    M F P V L L V A S K G Q S V S L S L S S S S S S L P L L P S Q Q A - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G06160.1     D F F A F E S S I I K E E G K E A T V A A E E E E K S Y R G V R K R P W G K F A A E I R D S T R K G I R V W L G T F D T
gm052299_Glyma1    - - - - - - - - - - - - - - - - - - - - - - K E Q K M Y R G V R K R P W G K F A A E I R D S T R N G V R V W I G T F D T
 
AT1G06160.1     A E A A A L A Y D Q A A F A L K G S L A V L N F P A D V V E E S L R K M E N V N L N D G E S P V I A L K R K H S M R N R
gm052299_Glyma1    A E A A A L A Y D Q A A F S T R G S L A V L N F P E E V V S E S L K D M P S K P W E E G S S P V L A L K R K H T M R R K
 
AT1G06160.1     P R G K K K S S S S S T L T S S P S S S S S Y S S S S S S S S L S S R S R K Q S V V M T Q E S N T T L V V L E D L G A E
gm052299_Glyma1    S N S K K K S K I D Q - - - - - - R E Q L D F S S S S Q N - - - - - - - - - - - - - - - - - - - - - V L V F E D L G A E
 
AT1G06160.1     Y L E E L M R S C S
gm052299_Glyma1    Y L E Q L L S L T S
 
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