fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp003312 not found in 354aa AT5G14340.1 1st_not 0.453051643 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06180.1     MGRRPCCEKIGLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGLLRCGKSCRLRWINY
pp003312_Pp1s43 MGRKPCCEKVGLKRGPWAADEDKKLVSYINAHGVSCWRAIPKLAGLLRCGKSCRLRWTNY
                ***:*****:***:***:*:**: *:.**. ** . ***:***************** **

AT1G06180.1     LRPDIKRGNFTPHEEDTIISLHQLLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRL----
pp003312_Pp1s43 LRPDLKRGGFTDAEENLILDLHATLGNRWSKIAMQLPGRTDNEIKNYWNTHLKKKLCSMG
                ****:***.**  **: *:.**  ****** ** :*********** *:*****:*    

AT1G06180.1     ----------------------------------HHSQDQNNKEDFVSTTAAEM------
pp003312_Pp1s43 LDPVTHKPVDSACTDGDTETADEGNLDSSEGHSGHSKVMENSLASKVSDELAQLKTIDYL
                                                  * .  :*.  . **   *::      

AT1G06180.1     ----------PTS----PQQQSSSSADISAITT---------------------------
pp003312_Pp1s43 GERMDTQKPFPTTCNEIPEQGAISGKSCSLDTTNSFKEHKPDVFVKLEEGTYTTGPDHMN
                          **:    *:* : *. . *  **                           

AT1G06180.1     ---LGNNNDISNSNKDSATS----SEDVL--AIIDESFWSEVVLMDCDISGNEKNEKKIE
pp003312_Pp1s43 AIALENHTPLGPNSEGAADSCWLPQEQSLDTAVGGSSFYQEVAVMN--------------
                   * *:. :. ..:.:* *    .*: *  *: ..**:.**.:*:              

AT1G06180.1     NWEGSLDRNDKGY---NHDMEFWFDHL-------TSSSCIIG----------------EM
pp003312_Pp1s43 --GGGLFRQLSGFTQSNMATAGWSTYFGETPGQPSSTGCSISSWNQSFVQPPGVPPSKEI
                   *.* *: .*:   *     *  ::       :*:.* *.                *:

AT1G06180.1     SDISEF----
pp003312_Pp1s43 QKLAAILDQI
                ..:: :
BoxShade v3.31 C (beta, 970507) Output
AT1G06180.1     M G R R P C C E K I G L K K G P W S A E E D R I L I N Y I S L H G H P N W R A L P K L A G L L R C G K S C R L R W I N Y
pp003312_Pp1s43    M G R K P C C E K V G L K R G P W A A D E D K K L V S Y I N A H G V S C W R A I P K L A G L L R C G K S C R L R W T N Y
 
AT1G06180.1     L R P D I K R G N F T P H E E D T I I S L H Q L L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L - - - -
pp003312_Pp1s43    L R P D L K R G G F T D A E E N L I L D L H A T L G N R W S K I A M Q L P G R T D N E I K N Y W N T H L K K K L C S M G
 
AT1G06180.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H S Q D Q N N K E D F V S T T A A E M - - - - - -
pp003312_Pp1s43    L D P V T H K P V D S A C T D G D T E T A D E G N L D S S E G H S G H S K V M E N S L A S K V S D E L A Q L K T I D Y L
 
AT1G06180.1     - - - - - - - - - - P T S - - - - P Q Q Q S S S S A D I S A I T T - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp003312_Pp1s43    G E R M D T Q K P F P T T C N E I P E Q G A I S G K S C S L D T T N S F K E H K P D V F V K L E E G T Y T T G P D H M N
 
AT1G06180.1     - - - L G N N N D I S N S N K D S A T S - - - - S E D V L - - A I I D E S F W S E V V L M D C D I S G N E K N E K K I E
pp003312_Pp1s43    A I A L E N H T P L G P N S E G A A D S C W L P Q E Q S L D T A V G G S S F Y Q E V A V M N - - - - - - - - - - - - - -
 
AT1G06180.1     N W E G S L D R N D K G Y - - - N H D M E F W F D H L - - - - - - - T S S S C I I G - - - - - - - - - - - - - - - - E M
pp003312_Pp1s43    - - G G G L F R Q L S G F T Q S N M A T A G W S T Y F G E T P G Q P S S T G C S I S S W N Q S F V Q P P G V P P S K E I
 
AT1G06180.1     S D I S E F - - - -
pp003312_Pp1s43    Q K L A A I L D Q I
 
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