fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G06180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001186 not found in 273aa AT3G23250.1 1st_not 0.523474178 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G06180.1     MGRRPCCEKIGLKKGPWSAEEDRILINYISLHGHPNWRALPKLAGLLRCGKSCRLRWINY
pt001186_POPTR_ MVRAPCCEKMGLKKGPWTAEEDQILINYIQLHGHGNWRALPKQAGLLRCGKSCRLRWINY
                * * *****:*******:****:******.**** ******* *****************

AT1G06180.1     LRPDIKRGNFTPHEEDTIISLHQLLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLHHSQ
pt001186_POPTR_ LRPDIKRGNFSREEEDTIIKLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEKNH
                **********: .******.**::**********:*********************.:.:

AT1G06180.1     --------------------------DQNNKEDFVSTTAAEMPTSPQQQSSSSADISAIT
pt001186_POPTR_ VTPEIKGRSVDISRFDHELNTDQELLDSSNLAAGSDQTEEHRPISPQQCSS---DTSSLI
                                          *..*     . *  . * **** **   * *:: 

AT1G06180.1     TLGNNNDISNSNKDSATSSEDVLAIIDESFWSEVVLMD-----CDIS--GNEKNEK----
pt001186_POPTR_ T--GDIDISNNMCMKIESSDD-FPEMDESFWSEVLSADNSRIVSDFSAIGTEPQLQFPFS
                *  .: ****.   .  **:* :. :********:  *     .*:*  *.* : :    

AT1G06180.1     ----KIENWEGSLDRNDKGYNHDMEFWFDHLTSSSCIIGEMSDISEF
pt001186_POPTR_ PLVIEVEQVYAT---NSNMYD-STEYWHDLFTRA----GGSLDLPEI
                    ::*:  .:   *.: *: . *:*.* :* :    *   *:.*:
BoxShade v3.31 C (beta, 970507) Output
AT1G06180.1     M G R R P C C E K I G L K K G P W S A E E D R I L I N Y I S L H G H P N W R A L P K L A G L L R C G K S C R L R W I N Y
pt001186_POPTR_    M V R A P C C E K M G L K K G P W T A E E D Q I L I N Y I Q L H G H G N W R A L P K Q A G L L R C G K S C R L R W I N Y
 
AT1G06180.1     L R P D I K R G N F T P H E E D T I I S L H Q L L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L H H S Q
pt001186_POPTR_    L R P D I K R G N F S R E E E D T I I K L H E M L G N R W S A I A A R L P G R T D N E I K N V W H T H L K K R L E K N H
 
AT1G06180.1     - - - - - - - - - - - - - - - - - - - - - - - - - - D Q N N K E D F V S T T A A E M P T S P Q Q Q S S S S A D I S A I T
pt001186_POPTR_    V T P E I K G R S V D I S R F D H E L N T D Q E L L D S S N L A A G S D Q T E E H R P I S P Q Q C S S - - - D T S S L I
 
AT1G06180.1     T L G N N N D I S N S N K D S A T S S E D V L A I I D E S F W S E V V L M D - - - - - C D I S - - G N E K N E K - - - -
pt001186_POPTR_    T - - G D I D I S N N M C M K I E S S D D - F P E M D E S F W S E V L S A D N S R I V S D F S A I G T E P Q L Q F P F S
 
AT1G06180.1     - - - - K I E N W E G S L D R N D K G Y N H D M E F W F D H L T S S S C I I G E M S D I S E F
pt001186_POPTR_    P L V I E V E Q V Y A T - - - N S N M Y D - S T E Y W H D L F T R A - - - - G G S L D L P E I
 
0